Ruditapes philippinarum (Manila clam): 132742357
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Entry
132742357 CDS
T09557
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132742357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132742357
Spliceosome [BR:
rphi03041
]
Common components
Common spliceosomal components
SR proteins
132742357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Transformer
RRM_5
SET_assoc
Lig_C
Motif
Other DBs
NCBI-GeneID:
132742357
NCBI-ProteinID:
XP_060586714
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MSGSKVYVGRLASDTREKDVERFFKGYGRLRDVSMKNGYGFVEFDDPRDADDAVYELNGK
ELLGERLIIEHARASRGRGGGGGFRGGGGGRFGGGGGYGGGGYGGGGGRYGGAAAVAETG
MVVVVDATDTAVIEEEEEEGGHMAISQLYCGRKTSGAPLYGPPQRTDYRLRVENLSSRAS
WQDLKDHMRTAGVEVSFADAHKQRTGEGVVDCATESDMLRALEKLDGMDINGKKIRLVEE
RGGSSSGGGGRDRGRRSRSRSRSRSDSRSRSRSRSKSRSRSSSPPQERSRRRSGDEPEDD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctctaaagtttatgttggaagattagcaagcgacacaagagaaaaagatgtc
gagagattcttcaagggttatggaagacttcgggatgtttcaatgaaaaacggatatggt
tttgtggaatttgatgaccctagggatgctgatgatgctgtctatgaacttaatggaaag
gaacttcttggtgaaaggttaatcattgagcatgcgcgtgcatctcgaggacgtggtggc
ggtggtggattcagaggtggtggaggtggaagattcgggggcggtggtggttacggtggg
ggagggtatgggggtggtggtggtagatatggtggggcggcggcggtggcagagaccggt
atggtggtggtggtggacgcgacggataccgcagtgatagaggaggaggaagaagaggga
ggtcatatggcgatttctcagctttactgtggaaggaagacctcaggtgcccctctatat
ggtccaccacagagaacagactatagattgagagtagaaaatctgtcatcacgtgccagt
tggcaggatctgaaagatcatatgaggactgcgggtgttgaagtttcgtttgccgacgct
cacaagcaaagaaccggtgaaggtgtcgtggattgtgctacagaatcggacatgctccga
gccctggagaaactcgacggtatggacattaatggtaaaaagatcagactggtggaagag
agaggtggtagcagcagtggaggcggaggacgtgaccgaggccgaagaagtcgctccagg
agcaggagtcgttcagacagtcgatctaggtcaaggtcaagatccaagagtaggtcaagg
tcgagctccccgccacaggaacgctcacgtagaagatctggcgacgagccggaagatgat
tga
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