Ruditapes philippinarum (Manila clam): 132742464
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Entry
132742464 CDS
T09557
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23284
C1q-related factor
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132742464
Membrane trafficking [BR:
rphi04131
]
Endocytosis
Phagocytosis
Opsonins
132742464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1q
SlyX
Cep57_CLD
ZapB
DUF16
BclA_C
NtrY_N
Fez1
Muted
ISG65-75
Motif
Other DBs
NCBI-GeneID:
132742464
NCBI-ProteinID:
XP_060586877
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MFTLKVFISLCVILLTFEDVEVVANDVKNLNGISRATLEEIVLGMSDKIKSLERKVDKLG
HLEDKISSLAATVALKSEKIEELEREIKRAAVEENGAKETVSVRAEVNNGENPADRSLTK
NKLRGMRQVETVAFSAVMTHAVQHLGDKQTIKFDKVLLNDGSGYVPSTGVFTAPLSGTYL
FIYNFGHHGTGETWLELVKNGNVQNAAAVEGHFGGQNLQGGNAAIIRVNQGDTVWVETWQ
VSDVSAQDTFTTFSGVFLY
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtttacattaaaggtgtttatcagcttgtgtgttattttgttgacgttcgaagatgtt
gaagtcgtcgccaacgatgtgaaaaatctgaatggaatcagcagggctactctggaagag
attgttctgggtatgtccgacaagatcaaatccctggaaagaaaagttgacaagcttggg
catttggaagataaaatttcgtcattagcagcaacggtagctttgaagagcgagaaaatc
gaagaattggaacgggagattaaaagggctgctgtagaggaaaatggtgcaaaagagact
gtctccgtcagagcagaagtaaataatggggaaaaccctgcagatcggtcgttgacaaaa
aataagttaagaggaatgcgacaagttgaaacagtggcgttctccgctgtaatgacacat
gctgttcagcaccttggagacaaacaaacgattaaattcgacaaagtacttctcaatgac
ggtagtggttatgtaccaagtactggcgtcttcaccgcacctttatccgggacctacctg
tttatttataactttggacatcatggtacaggtgaaacctggctggaactcgtgaaaaac
ggaaatgtccagaatgccgctgccgttgaaggtcattttggaggtcaaaacctgcaggga
ggtaatgcagcaatcattagggtgaatcaaggagacacggtgtgggtggagacatggcaa
gtgtcagacgtgtcggcacaggatacattcactacattttccggggtgtttctgtattga
DBGET
integrated database retrieval system
