Ruditapes philippinarum (Manila clam): 132742507
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Entry
132742507 CDS
T09557
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11848
ubiquitin carboxyl-terminal hydrolase 20/33 [EC:
3.4.19.12
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rphi01002
]
132742507
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132742507
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132742507
Peptidases and inhibitors [BR:
rphi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132742507
Ubiquitin system [BR:
rphi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132742507
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
DUSP
zf-UBP
UCH_1
zf-CHY
DUF6057
Motif
Other DBs
NCBI-GeneID:
132742507
NCBI-ProteinID:
XP_060586929
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MSQNKKTSTCPHVTSLGAVSWSIIRKAQKHEVCDTCEMRATNLWLCLVGRCTYVGCGESL
KDHSSHHAQLDFHCLAINLATLRIWCYRCQSEVFHDRNNPPVLIPDKLSKEMEEDDQHSE
FTPDNSPQHSAFGGDDTESDGDDEVHHGKPKGLTGLQNLGNTCYLNAALQALSNCPPLTR
FFLDCGGYVHADRSMSLSKNYMKLMHEIWHRKRPSYLVPSGIVSGIKLVHPMFRGYSQQD
TQEFLRCFMDQLHEECKQPIIEELDDREAETEIHEEHQTSCDWSTSCQWKPAAAVANQMV
TMKLVILHQEVNSEDASDAINRPGYLKVKKDSINMSMRAGDNTSTCSDDQRSDSGDFVDA
ENEPLRSRRRGGKRTVSDSSDREQANLYSRRQPVQYKQSVSTVTVSTTKETFQDLSLPIP
SKDHLHMLHSTSHNSGQKGGACSEVHQGWLQWMVEWMRSWFLGPVITLQDCLAAFFSADE
LKGDNMYSCEKCKKLRNGLKYSKVLQLPEILSIHLKRFRHEFYSSKIGTYVSFPLTNLDM
KPYLHKDHVSNVTVYDLVAVICHHGTAGGGHYTAYCQNVLTEHWYEFDDQYVTEVDVNQV
INCEAYVLFYRKQNDHMNSVRQEAMELMNKREPSLMHFFVSKQWINRFNTFAEPGPITNQ
DFLCPHGGVPPSKTEYIGDLVEPLTQAMWEFLHQRFGGGPSCNHLFPCTTCHKELETLRN
RQKTELEEFIKLNERFKEEDNPSVIYAISMSWFKEWENFVREKEDNPPGPVDNKRIAVMK
NGQLIVRPNSDHGQLSKDMWQYLYQIYGGGPELVIKQINTQPERSRTLAEQASMASGTKG
HERVNSESSSAATSRGNPDSVGKGNPDSMGKGNPDSLENSTECQDSTGNVRGKRDSTGSS
GTSRGNLDTTETGSGQGCSDNVSARSGSGAREDETKGSESDMPENLEE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaataagaaaacatcaacttgtccacacgtgaccagtctcggggctgtttca
tggagcatcatccgaaaagctcaaaagcatgaggtatgtgatacgtgtgagatgcgagcc
acaaacctttggctatgtttggttggcagatgcacatacgtggggtgcggtgaatcgtta
aaggaccacagctcacatcatgctcagttggattttcattgcttagcgattaacctggca
acgctacgaatctggtgttaccgctgtcaatccgaggtgttccacgatcgaaacaatccc
cctgtgttaattccggacaaattaagcaaggagatggaagaagatgatcagcatagtgag
tttacaccggataactctccgcaacattctgccttcggtggtgacgacacagagtctgat
ggtgatgacgaggtgcaccacggcaaacctaaaggtttaaccggtctacagaaccttggc
aacacttgttacctcaatgctgccttacaagccttgtctaactgcccaccattgacgaga
tttttcctggattgtggtggatacgttcatgcagatcgtagtatgtcgctcagtaaaaac
tacatgaaacttatgcacgagatatggcatcgtaaaagaccgagttacttggtaccaagc
ggtatagtgagtggtataaagttggtacatccgatgtttagagggtattcccaacaggat
actcaagagtttctaagatgtttcatggaccagctacatgaagaatgtaaacaaccaatc
attgaggagctagatgaccgggaggcggagactgaaattcatgaagaacaccaaacttca
tgtgattggtcgaccagttgtcaatggaaaccagcagctgcagtagccaatcagatggtg
actatgaaacttgtgattctgcatcaggaagtgaactcggaggatgcctctgatgctata
aatagacctggttatctgaaagttaagaaagacagtataaatatgtcgatgagagccgga
gacaatacaagtacttgttctgacgatcagagaagtgattctggcgactttgttgacgca
gaaaatgaaccattacgatcgcgacggcgtggtggcaagaggacagtgtcagattcttcc
gaccgagagcaagccaacttgtacagcagacgacagccagtccaatataaacaatctgtt
agcacagtaactgtttctacaaccaaggagacttttcaagatttatcattaccaattcca
tcaaaggatcatttgcatatgttacattcaacaagtcataactccggacaaaaaggcgga
gcctgtagtgaggtacatcaaggatggttacagtggatggtagagtggatgagaagctgg
tttttgggacctgtaatcactttacaagattgtctggctgcattcttctcagctgacgag
cttaaaggagataacatgtatagctgtgaaaaatgtaaaaagttaagaaatgggttgaag
tattccaaagttttacaactaccagagatattaagcatacacctcaagagattcagacat
gagttctactcatccaagatcggcacttatgtgtccttccccctgactaatctagacatg
aaaccataccttcataaagatcatgtaagcaacgtaacagtgtatgatcttgtagcagtg
atctgtcaccatggaacagccggaggtggtcattacacagcatattgtcagaatgtgctt
acagaacattggtatgagtttgatgatcaatatgtgacagaagtggacgtaaaccaggtc
atcaactgtgaggcatatgtcctcttttataggaagcagaacgaccacatgaatagtgta
agacaagaagctatggaattgatgaataaaagagagccaagtttgatgcatttctttgta
tcaaagcagtggattaacagattcaacacatttgcagaacctggaccaatcacaaaccag
gattttctgtgtccacatggtggtgttcccccaagtaagactgagtacattggtgatctg
gtagaaccactgacacaagcaatgtgggagtttctgcaccaaaggtttggtggaggtccc
tcgtgtaatcatttgttcccgtgcacaacatgtcataaagaactagagactttacgaaac
aggcagaaaactgaactggaggagtttataaagttaaatgaaaggtttaaggaagaagat
aatcctagcgtgatttatgctatcagtatgtcgtggtttaaggagtgggaaaactttgta
agagagaaagaggacaatccgccagggccggttgacaacaagagaatagctgtgatgaaa
aatggtcaactgattgttcggccaaactctgatcacggtcagttgtcgaaagatatgtgg
caatatctgtaccagatttatggtggtggtccggaactagtcatcaagcagatcaataca
caaccggaacggtcacgcacattagctgagcaggcttcgatggcatctggtacaaaagga
cacgaaagagtgaattctgaatcctcatctgcagcaacgtcgaggggaaatccagattct
gtgggaaagggaaatccagattctatgggaaagggaaatccagattctttagaaaattca
acggaatgtcaggattccactggaaatgtaagagggaaacgagattctaccgggtctagc
ggaacatctagaggaaatcttgatacaactgaaacaggaagtggtcagggctgttcagat
aatgtgtcagcaagaagtggttctggtgcaagagaggacgagacaaaaggttccgagtcg
gacatgccagaaaatttagaagaataa
DBGET
integrated database retrieval system
