Ruditapes philippinarum (Manila clam): 132742626
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Entry
132742626 CDS
T09557
Name
(RefSeq) glutamate receptor ionotropic, kainate 2-like isoform X1
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132742626
04082 Neuroactive ligand signaling
132742626
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132742626
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Glutamate (ionotropic)
132742626
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Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
EphA2_TM
DUF4834
DUF325
TMEM154
Motif
Other DBs
NCBI-GeneID:
132742626
NCBI-ProteinID:
XP_060587063
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MAKIYGLQLLNSDNFPKGLNEIFKGNKSRLEQGLMSDVVGILRHYLQTHVQDCKKEPATN
SSMTADDFRRVILNAVTPYSGALGDYIWPKVSQKETSNVRKDYPIAIYRYINGIERFAQV
TFGKNEAKVNAFMLSEEPHVKDPFMGKKFDVIAKQDEPFVMKNGDKYEGFCVDVLTELSR
SLKFDYEIFELEGSTINQNGKSTVWDDIITQLKVGNASMAIGAFAVTAQREAKISFSYTI
ISSAVSLLMKKPPDTTNYFQFLGPFSPLLWMMIVVFFLSVGLGLYFMARFDSTQEESEQK
FDLKESMWYSLTILLQGSAEYSPQTTSMRTIIAFFWFCTLVINAAYTANLAAFLTLQQID
NRIKTVDSLARQSNVKYGILNNSDLMQFFRESRDDTYERMWTFMKLYEDISLLSTRKKGL
DFVQNGVPTSSGKAEFIYLDDGVINNYNAQQNCELESIEENFGVKHFSIGFPKGAPYRSD
INRALLQLKENGVLDRLRDKWWTSQKSNCTVKTSDAGSKTNTASELNISNMFGVFIFLIA
FAVLAVLYEIGLIIFKFTQERKKKKKEESEIEEKTNGNSVQFGDTTYVDEN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatctatggtttacaacttctcaattcggacaactttcctaaaggattgaat
gaaatattcaaggggaacaaatcacgactggagcaaggattgatgagtgacgtagttggt
attttacgacattatctccagacccacgtgcaagattgtaaaaaagaacctgcaaccaac
tcaagtatgacggccgacgacttcagacgagtgatattaaatgctgtgacaccgtacagt
ggagcactaggtgactacatctggccaaaggttagtcaaaaagagacgtcaaacgttaga
aaagactaccctatcgcaatctacagatatatcaatggaattgagaggtttgctcaggtt
acttttggaaagaatgaggcaaaagtaaacgcctttatgctaagtgaagaacctcatgtt
aaggatcccttcatgggtaaaaagtttgatgtcattgctaaacaggatgagccgtttgtt
atgaagaacggtgataaatacgagggtttttgtgttgatgtcttaacagaattatcaaga
agtctgaagtttgactacgaaatttttgaacttgagggttcaactataaatcaaaacggg
aaatctacagtctgggatgatattataacgcaacttaaagtcgggaatgcttcgatggca
ataggtgcatttgcagtcactgctcaaagggaagccaaaatatcgttttcgtacactata
atatcgtctgcagtcagcttgctgatgaaaaagcccccggatacgacaaactactttcag
tttctaggaccattttcacctttgctgtggatgatgatcgttgtgttcttcttatcggtt
ggtcttggtctgtactttatggcaagatttgattctacccaagaagaatctgaacaaaag
tttgacctcaaggagagtatgtggtactctctgacaattttactgcaaggttctgccgaa
tactcaccacaaacgacatccatgcgcactattatcgcgtttttctggttctgtacttta
gtgataaatgctgcatacactgcaaaccttgcagcatttcttaccctccaacagattgac
aaccgaatcaaaactgtagattctttggccagacaatcaaacgtcaaatacggtatcctc
aacaacagtgaccttatgcagttctttagagaatccagggatgacacttatgaacgtatg
tggacatttatgaaactgtacgaagacatctcattactttctacaaggaagaagggtttg
gactttgttcaaaacggagtaccaacttctagtggaaaagcggaattcatttaccttgac
gacggcgttataaataattataatgcacagcagaactgtgagcttgagtctatagaagaa
aattttggagtcaaacacttcagtatagggttcccaaaaggagcaccatatcgaagcgat
atcaatagagctcttttacaactcaaagaaaacggggtcttagaccgacttagagacaaa
tggtggacaagccaaaagtcaaactgcactgtcaagacttcggacgctggatccaagaca
aatacagcatcagagttgaacatttctaacatgtttggtgtgtttatttttctaattgcc
ttcgctgttcttgctgtgttgtacgaaatcggtttgatcatcttcaagttcactcaagag
agaaaaaagaaaaagaaagaagaatctgaaatcgaggagaaaacaaacggaaatagtgtg
cagtttggtgacaccacctacgtcgatgaaaattaa
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