Ruditapes philippinarum (Manila clam): 132742718
Help
Entry
132742718 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HECTD4
KO
K17849
E3 ubiquitin-protein ligase HECTD4 [EC:
2.3.2.26
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132742718
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132742718
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
HECT type E3
132742718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
132742718
NCBI-ProteinID:
XP_060587167
LinkDB
All DBs
Position
Unknown
AA seq
3197 aa
AA seq
DB search
MASQSQENCQWLSVTEETLFLHDGLMRVTDLVELPTDVNNAQDSENEVISFDLKNPSELS
DLLLAVCGTHNNAYAKLLEYRLNALRGLWCAQKQLSLDEESEKESNCTEETIALLKKQGL
WKEPEQASFSTRVSVLLVLPLLQSQSRIDPNLCGVTSGVLLGCLKDCSPLSLAKEPGDCL
KGLENLLCSWLGEKIESADSYEVEDKLQRKTIASALVALACARGHLKTFIHTVHLLLTLK
DIDCMPVADILGKLLETEGGPGHVPALLGSKHILCWGFEDLLSGTEKESGEKDKADGEIG
RSLASDGVFLYTTNACGKGLAKVGTGLHGTLRGYIYSRNPEIGPGKVAVGDGCLIYRPQS
YDGEADVQNFFQILDKHFLQPVKTIPKPEQYVEDGPCTTVAFCSDGSYFYWIWCPSLLTD
KNAKGIPVNCEMFVIQKEDYAVEPGRPRIILTKKDEAGAKALNDSLMSRLRPMYRGSASA
LAALAGAENGVAKKEDPVQQTGSTSCGILLKVLLKTPLFIEGSHVVMLTSLPGGSASNAA
RSLFGSSGGLSSLRSLATNQCFSLTDGQFVQRADLMDAPSCAIARGASISSLGLCFDVLN
NVIWSCSNDWMDQFYNPGHQAPHHIKTKLCIQHNKPTEQTGDNTVKMNVVIQQLLQHVGS
MCLHQIHSDLLYTPFGSYTVQQYPVDYTNLERICDILNNSISTGHTQTIICALIVLQLIF
KMSVIKPAKPAENSLVEKTRSLVWKLVIVERDDNMMTHSESVQREACMVVASGLMVLYPT
VEKRVELMRLLLTGENPGLTCLRDKLFVDFTDQLKGQITKLDQFYNLSLTDDITSLLLKM
VVKKSCNLLHKAVKLEKEQFDCMLTEIPLSSPCLRYLMSLQSFLLRETILLPADENGNTD
SEKLQTLQTMVQSFAEKVFTGACQVLEMLLNCCNQVIHKNTEDLENRLQGLEKVSKATIL
GHMLPSLMTAMTHKNLQCLNLADTLMPQLVKLVVLSSQAALLLKSQVQAILHEVEPDTDS
DVIDIIGQTVEKVDLKEHEEQGFLAGLKIPAPWASGKAIESIHPVRDNYKFKETVHIPGA
RCLYLRFDTRCASQYDYDKMILYAGPNTTSKKVAEYGGNTYGFGSRSVLGSGWPKDLVRV
EGDTVTLSFEMRSGREHNTPDKAMWGFLVTVRAQETPEEVSNGLPFLADLGLGLSVLACT
MLHLLYQGPEKTKDEESCLHLLKSKLLQRCVWQSESFTSSPASPKIPPKSQQAVDPTLLP
RSPRIPRIKLPSEIMKNLLGLSPRHPPHLRSSMKEAIKPDVILERVTSAVVKHLGLEDTV
RFFTPSKESQTDEFVLLTSVMEEICRRTDALVRQLQALADLEQRWHTEVLDRKEDKTVEA
PPFFHDFHLQESKIKELSMLCFMKSIALDTLKIEETAKELREKFDNDVLSNDFDKTDSLH
RTRQLADGILARLDLLLHVNISPGDTGSLTRTVSQCIEAIKTGSNVMVKSDTDIFHSTIM
RSISAPSGVNQFQDDTAIDFLKMHKRRPKHKQGPISILQDLIEDQEEKGQSPHVILIGQL
FSFIGSNPEKAISSEAFLKTAQLRFWRGNTRKQALIHMKELLSAASRVGGATHLVAAVTS
VLRHGPRVEELTCGGMVNQVREAFAETMTSVVQVAARYPIACCNSIGLLCVVPYTRAEEK
CLVRSGLVHLLDKLCSLANYRAESRESQSTRQKVSAMAWAGFQVLANRCVMWETEEGSQY
EELEHSGLARQVSVLLTNHLARATESSGNEAAGTEALQEVLSLLNNLSRSHMGKAILSQP
ACVSKLLSLLLDQRPSPKLVLIILQLCRVALPLMDALDCEQVQLPNWGHSLVSSHWSTTK
PISDPPAKIVSLLLARLGDFLVPGDVATVASMTNSLLMQILTKIKTVQEDTAIQNGRLSV
FVHKRDDQFSHEVIQPLLSSDSRPFKLGPGSNVDKVVRLDREMTKSNKAEVVTEDALSAL
RKAAKWAQMGLVVSTGAPVDSSPTEVTSGDKKKTDKEVICKDKNAELARTDPVRPFISGH
VANSMAAEVIELLHGLLNSTNHHTASEKSWSDAVQRVLTNAMTGLPVLLNSIDSLSSPRC
HSHQLMSMARQVNAALCALGGFQEMIKPGCKVEVTGEVENSTGIVVSMSQQTGMVSIELD
PDPEGTYTPRYSDTVQVPFSRVQPCRNRMFSSRQLSMTDAIVTAMQAILLPHDDNISSLQ
QVLPLADDGNSMSNQICRVVAELETRACTVLALYLQDIDFTKEFIQHCGSTIDMLKTLAK
DCSTGVRKPVLESHCERLRTLYRDCAKPPPPPSKVDNRNKEMTWDTSRNFPPVRACLFSH
NLTGVTFLGDPSAGSGLPRGTLVYANIPIPLQAPSFYWELEICSFGDSQDESSAYVSFGF
APPAEKKDGAWTNPIGTCLFLNNGKAVHYNGASLLQWRSVRLDCLVGVGDIAGIGWERTS
DSPVQGETPKGKVYFTFNGRKLQPWIEDVAGAMYPVVHIQKKSTRVKANFGARPYAFAEG
QQHREAADEADDLTREIRESFGHLPFHSTSDSDSDGAVSAPSTPSNLSEINELNLTAGPL
CKTVPIPKPLKEYNPDNCRFYKLFHSYDSMITTGPDPKAQLPAQDTLSDEESNEDESNNE
DHHALLVKAWEQKVFPVIRRRFRNEAERKDGLEQIKGALQIGMTFIARQTVEFLYEENGG
MPRDLHLPTIDDIKEDLAKFTIDRVRKGTTVVIRGSTGSSASGATVLPKFAVRSMLKTFG
LTGTVLDVENSNELVQVETYLRSEGVLVRYWYPLNMLERPPQGMRKSTITGGQILDTSNV
NIHKELIRSERTVARMYCRTALLKLIDHCNSSAMEVISCSPSLASGMAASAALLQELDIE
NIQLLSNELLKAPQPHGTIKAKSLVLSDSSKHCLAAHSCSLSDLMYENVDRLKKELAIAI
ARAAGQGEDYLFELTNQICTCLQTAPEMFPYEEFSGQGKSLRFMEAFLFLFRTSLYKSPW
ARIYCYTGQRIKKTGQVSKQEVVSYPRDTSSTSNHAEQYTPAIIPCDYLQETERQGRGKG
RKPQKSRQRKNDGNFTEKFLAVTPATIHPHEIRISAVELSSEKYSCLQGVPVESLRLRFA
FLQSLNNTLETFFLPLIDLRPWQTYNRSTSALLSRIRGLLFYDTKCALMNRILNATAKRK
PDQAAPEITLDPLEILE
NT seq
9591 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcagtcccaggaaaattgccaatggttgtctgttaccgaagaaacgttgttt
ctgcacgatggcttgatgcgcgtaacagatttggtggaacttccaactgatgtaaacaac
gctcaggattcggagaatgaagtgatctcgtttgatttgaaaaatccttcagaattgagt
gacttattgcttgctgtttgtggtactcataataatgcatatgccaagcttttagaatac
agattaaatgcattaagaggactttggtgtgctcagaagcaactctctttagatgaagaa
agtgaaaaagaaagtaactgcactgaagaaacaattgctcttttaaagaaacaaggctta
tggaaagaaccagagcaggcatcattctctacgagagtcagtgtccttttggttttgcct
cttctgcagtctcaaagtcgcattgaccctaacctgtgtggtgtgacatcaggggtattg
cttggttgcctgaaggattgttctccactcagtcttgctaaagagcctggtgattgcttg
aaaggcttagagaatctgttatgcagttggttaggagaaaaaattgaatcagctgatagt
tatgaagttgaagataaactacagaggaagactattgcatctgctttggttgcgctggct
tgtgcaaggggtcatctgaagacttttattcacactgtccaccttcttttgacactgaag
gacattgactgtatgccagtggctgatattttaggcaagcttttagagacagaaggaggc
cctggacatgtacccgctttattaggcagtaaacatatcctctgctggggatttgaagac
ctcctcagtgggactgaaaaagagtcaggagaaaaggacaaagctgatggggagattgga
agaagtttagcttcagatggagttttcctgtatacaacaaatgcatgcggtaaaggacta
gcgaaagttggcacaggacttcacggcactctaagaggatatatttactctagaaaccca
gagataggccctggtaaggttgccgttggtgatggatgtttaatatacagaccacagtca
tatgatggtgaagctgatgtacaaaatttctttcagattctcgacaaacatttcctacag
ccagtgaaaactatacctaagccagaacaatatgtggaggatggcccatgtactactgtt
gcattttgcagcgacggttcctacttttattggatatggtgcccgtctttgttaacagac
aaaaatgcaaagggaataccagttaattgtgaaatgtttgtgattcagaaagaagattat
gctgttgagccaggtagacccaggataattctaacaaagaaagatgaagctggagctaag
gctctcaatgactcacttatgtcccgacttagaccaatgtacagaggctcagccagtgct
ttagcagcattagccggggcagagaatggagtggcgaagaaggaagatcctgtgcagcag
acaggaagtaccagctgtggaattctgttgaaggttttattaaaaacaccattatttatc
gagggtagccacgttgtaatgttgacatctctgccagggggcagcgccagtaatgcagca
cggtctttgtttggcagcagtggaggtctttcttcactaagatcactagccacaaaccag
tgtttcagtttaacggatggacagtttgtacagagagcagatctgatggatgcaccaagt
tgtgccattgccaggggagcctctatttcctctttaggcttgtgttttgatgtattaaac
aatgtgatatggagttgtagtaatgattggatggaccagttctataacccaggtcatcag
gcaccacatcatatcaaaacaaaattgtgtatacaacataacaaaccaacagaacaaaca
ggtgataacacagtgaagatgaatgtggtaatacaacaactgttacaacatgttggaagt
atgtgcctgcaccaaatccacagtgatctactgtatacaccatttggcagctacaccgta
caacagtacccagtagattacaccaatctggagagaatctgtgacatactgaataattca
atatctacagggcatactcagactataatttgtgctttaattgtgttacaattgatattt
aagatgagtgtgataaagccagcaaaacctgctgagaattcattggtggagaaaacaaga
tcattggtgtggaaacttgtgattgttgagagagatgacaatatgatgactcactcagag
agtgtacagagagaggcatgtatggtggtggccagtggcctcatggtgctatatccaact
gtagaaaaacgtgtcgagctgatgaggctcctgcttacaggtgaaaatccaggactgaca
tgtttaagagataaattgtttgtagactttactgaccagttgaagggacagatcacaaaa
ctggaccagttttacaacttaagtttaacagatgatattacatcactgttgttgaagatg
gttgtaaagaaatcctgtaatcttctccataaagctgtgaaacttgagaaggaacagttt
gactgcatgctaacagaaatacctttgtcaagtccatgtctcagatatctgatgtctctg
cagtcatttctattgagagaaacaattttattaccagctgatgaaaatggaaatacggat
agtgagaaactacagactttacagacaatggtacagagttttgcagagaaagtgtttact
ggtgcttgtcaggttcttgaaatgttgctcaattgttgtaatcaagtaattcacaaaaac
acggaagatctggaaaaccgcctgcaaggcctggaaaaggtttccaaggcaacaatacta
ggtcatatgttaccttctctgatgacagccatgacacataaaaacctacagtgtctaaac
cttgctgatacattgatgccacagcttgtgaaacttgtagttctgtctagtcaggctgct
ctgttgttgaagagccaggttcaagctattctacatgaagtggaaccagacaccgactct
gatgtcattgatattattggtcaaactgtagaaaaagtcgatttgaaggagcatgaagag
caagggttcctggctggactcaagatcccggctccctgggcgtctggtaaagccatagaa
agtattcaccctgtcagagacaattacaagtttaaggagacagtacatataccaggggcc
aggtgtctttatttgagatttgatactcgttgtgcttcacagtatgattatgataagatg
atcctgtatgctggtcccaacacaacatcaaagaaagtggcagagtatggtggtaacaca
tatggttttggcagtagaagtgtcctaggatctggctggccaaaagatcttgttagggtg
gaaggagatactgtgacactttcatttgagatgagaagtgggagggaacataacactcca
gacaaagccatgtggggatttcttgttaccgtcagagcacaggaaacaccagaagaagtg
tccaatggcctgccatttttggcagatttaggccttggcctgtcagtgcttgcctgcaca
atgctacatttgttgtatcaaggtccagagaaaaccaaagacgaggaatcttgcttgcat
ttacttaaatcaaaattgttgcaaaggtgtgtttggcaatcagaatccttcacatcaagc
ccagcttctccaaagatcccaccaaaatcacagcaggcagtagacccgacattattacca
aggagcccaaggattcctagaataaaactgccttcagagatcatgaagaacctgttaggt
ttatccccaagacatcctcctcaccttagatctagtatgaaggaggcaatcaaaccagat
gtgatactagaaagagttacctcagccgttgttaaacaccttggcttagaggacactgtc
agattctttactccatcaaaagagagtcagactgacgagtttgtcctcttaacttctgtg
atggaggagatctgtagacggacagatgcactagtcaggcaattgcaggcattagcagat
ctagaacaaagatggcatactgaagttttagataggaaagaagacaaaacagtagaagct
ccaccgttctttcatgatttccatttacaagagtcaaaaataaaggagttatcaatgctg
tgtttcatgaagagcattgctttagatacactgaaaatagaagaaactgccaaagaatta
agagagaaatttgacaatgatgtgttatcaaacgacttcgacaagacagattcccttcat
cgtacacgtcagttggccgacggtattttggcaagactagatctgttactacatgtaaat
atatcaccaggagatacaggaagccttactaggactgtttcacaatgtatagaggcgata
aaaacaggctcgaatgtgatggtaaagtctgacactgacatcttccactccaccattatg
aggagtatctcagcgccctctggtgtcaatcagttccaagatgacacggctattgacttt
ctcaaaatgcacaaaaggagaccgaagcataaacagggccctatatctatattacaagac
ctgattgaagatcaggaagagaaaggccagtcaccacatgtgattctgattgggcaactg
ttctcttttataggaagtaacccagaaaaagctatttcatcagaggcatttttgaaaaca
gcacagctaagattttggagagggaataccagaaaacaagctttaattcacatgaaggaa
ctactttcggcagcctcgagagtagggggagctacacatcttgttgctgcagtaacatca
gtgctaaggcatggtccaagggtagaagagttgacttgcggaggtatggttaaccaagta
cgagaagcgtttgctgaaactatgacgtcagtggttcaagttgcggctagatatcctata
gcatgctgtaacagtatcggactgttgtgtgttgtaccttatactagagctgaagaaaaa
tgtttggttaggtctggactggttcacttactggataaattatgcagtttggcaaactac
agagctgagagtagagaaagccagtctactaggcagaaagtatcagctatggcctgggca
ggctttcaggttctagccaatagatgtgtgatgtgggagacagaggaaggttcacaatat
gaagagttagagcactctggtcttgcacgacaagtttctgtcttactaaccaaccattta
gcacgtgccacagaatctagtggtaatgaagccgccggtacagaggcactgcaagaggtg
ctcagtctactcaacaatctgtcgaggagccacatggggaaagccatacttagtcagcca
gcctgtgtctccaaattactttcattattgctggatcaaagaccatctccaaagctggtg
ttgatcattctacaactttgtcgtgtagctttaccattaatggatgccttagactgtgag
caggtacaattaccaaactggggacacagtctagtgtctagtcattggagtacgacgaaa
cctatttcagatcccccggctaaaattgtctctctgcttttggcaagacttggtgacttc
ttggttccaggtgatgtggcaactgttgcaagtatgacaaacagtctattgatgcagata
ttaacaaagataaagacagtgcaagaagatactgccatacagaatggtcgtctgtccgtc
tttgttcacaaacgggatgaccagttttcacatgaagttatacagcctttactgagctct
gacagtcgaccatttaagctaggtcctggttctaatgtcgataaagttgtgagactggac
agggaaatgacaaagagtaacaaagccgaggttgtgacagaggatgccctatctgctctt
aggaaggctgcgaaatgggctcagatggggcttgttgtatctacgggtgcccctgtagac
tcttctcccacagaagtcacctcaggtgacaaaaagaaaacagataaagaagttatttgt
aaagataaaaatgctgagcttgcaaggacagaccctgtgcgaccttttataagtggtcat
gtagccaacagtatggcagctgaagtgattgaactattacatggtctgttaaacagtact
aaccatcacacagcctcggagaaatcctggtcagatgctgtacaacgggtgttaactaat
gcaatgactggtttaccagttttgttgaactcaatagacagtctaagttctcctcgatgt
cacagtcaccagttgatgtcaatggcccgacaagttaatgcagctctgtgtgcgttaggt
ggtttccaggaaatgataaaaccaggctgcaaagtagaggtgactggtgaggtagagaac
tccacaggaatagtggtcagtatgtctcagcagactggaatggtctctattgaattagat
ccagaccctgagggtacatataccccaaggtactccgacactgtccaggtgccatttagt
agagtacagccatgtagaaatagaatgttcagtagtagacaactgtcaatgactgatgcc
atagtaacagccatgcaagccatcttgttaccacatgatgacaacatctcatctttgcaa
caagtcctcccattggctgatgatggaaatagcatgtccaatcagatctgtcgtgttgta
gccgagttggaaaccagagcttgtactgtgctagctctgtatttacaagatatagatttc
acgaaggagtttatacagcactgtgggtccaccattgatatgctcaaaacactagccaaa
gactgcagtactggtgttagaaaaccagtgctagaatcccactgtgagagattgaggaca
ctatacagagattgtgccaaacctccacctcctccaagtaaagttgataacaggaacaag
gaaatgacatgggacaccagccgcaattttccaccagtgagggcgtgtttgttctctcat
aatcttacaggagttaccttccttggtgacccgagtgctggcagtggtttgccaagagga
actttggtctatgccaatatacctatacctttacaggcaccatcattttactgggagctg
gaaatttgttcatttggggacagtcaggatgagagttctgcgtacgtctcatttggtttt
gccccacctgctgaaaagaaggatggagcctggacaaatcccataggaacctgtctcttt
ctgaataatggtaaggcagtccattacaatggagccagtttactgcagtggcgtagtgtc
agactggactgtttggtcggtgtcggagatatagctggtataggctgggagagaaccagc
gactctccagtacagggcgaaactcctaaaggcaaggtgtacttcacctttaatggaagg
aaacttcagccatggatagaagatgtggcaggtgccatgtatcctgtggttcatatacag
aaaaagtcaacaagagtgaaggccaattttggtgccaggccgtatgcctttgccgaaggt
caacaacacagagaggccgctgacgaagctgatgatctaacacgagaaataagagaaagt
tttggtcatttaccgttccactctacgtcggactctgacagtgatggtgcagtttcggcc
ccttctacacccagtaaccttagcgagattaacgaacttaatctaactgctggaccattg
tgtaaaactgtaccaattccaaagcctctaaaagaatacaacccagataactgtcgcttc
tacaagttgttccactcctatgatagtatgataacaactgggcccgacccaaaggctcaa
ctcccggcccaggacacgctgtcagacgaagagtccaatgaggatgaatccaacaacgag
gaccatcatgcattgttagtgaaggcgtgggaacagaaagttttcccggtgatccgaagg
aggtttaggaatgaggctgagaggaaagatggtttagaacagattaagggggcattgcaa
ataggtatgactttcattgctcgacagacggttgaatttttgtatgaagaaaatggtggc
atgccacgtgaccttcaccttccaacaattgatgacataaaggaagatcttgccaaattt
acgatcgatcgtgtcagaaagggtaccacggttgtgatcaggggctccacaggtagcagt
gctagtggagccacagtgctaccaaagtttgctgttcgatctatgttaaaaacattcgga
ctcactggaactgttcttgatgtagaaaattctaacgagctagtccaggttgagacctat
ctgcgaagtgaaggtgttttagtcagatactggtacccgttaaatatgctagaacgacca
ccacagggtatgagaaaatctacgataaccggcggccagatacttgacaccagcaatgtc
aatatacataaggagttaattagatcagaaagaactgttgcaagaatgtactgccgcact
gcgttattgaagctgatagatcattgcaactcttcagctatggaggtgatatcctgctct
cctagtctggcctcgggtatggcagcaagcgcggccctgttacaggaactggatattgaa
aacattcagctgctgtctaatgagttgttaaaggcacctcagcctcatggtactattaag
gcgaaatcgttggtgttgtcggactcgtccaaacactgcctggctgctcacagttgttcg
ctatcagatctgatgtatgagaatgttgacagattgaagaaagagctagccatagccatt
gcaagagcagctggtcaaggagaagattatctgtttgaattgaccaaccagatctgtaca
tgtctgcagactgcaccagagatgtttccctatgaagagttttcagggcagggtaagagt
ttaagatttatggaggcctttctgtttcttttcagaacatccttgtacaagtctccatgg
gctcggatctattgctacactggtcagagaattaagaaaactggtcaagtatccaaacag
gaagtggtcagctacccgcgggacacatcctcaaccagtaaccatgctgaacagtacact
ccggcaataattccctgcgactatctccaggaaactgagcgtcaaggtagaggtaaaggt
agaaaaccacagaaaagtcgccaaagaaaaaatgatggcaactttacagaaaagttttta
gcagtcacaccagccacgatacatcctcatgagattagaatttctgcggtagaactttca
agtgaaaaatattcttgtctgcaaggagttcccgttgagagtttacgactgagatttgct
tttctgcaatctctgaacaacaccctagaaacatttttcctgccactgatcgacctgcga
ccttggcagacctacaacaggagcacatcagcactgctatctagaataagaggactgctt
ttctatgacactaagtgcgctttgatgaatagaatcttgaatgcaacagcgaagagaaaa
ccggaccaggctgcaccggaaattactcttgatccacttgagatattggag
DBGET
integrated database retrieval system
