Ruditapes philippinarum (Manila clam): 132742774
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Entry
132742774 CDS
T09557
Name
(RefSeq) gamma-aminobutyric acid receptor alpha-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132742774
04082 Neuroactive ligand signaling
132742774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132742774
Ion channels [BR:
rphi04040
]
Ligand-gated channels
GABA-A
132742774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
132742774
NCBI-ProteinID:
XP_060587233
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MGPVSERSMDYSMDCYFRQLWIDERLALNVSLPNISLNIKVLERLWYPDTVFLNGGKSFV
HMVPMPNKFFRINKDGSVLYSQRLTIKATCKMRLEKYPLDSQKCQLLVGSFAYTIDDVIY
EWRFGRHNSVEIAADMTLSQFDLLQAPCFNSTSILRGAPHSVLSIHFYLRRHMGFFLINV
YVPCCLLVVLSWVSFWINREATSDRIALGTMTVLTMTFIGLDNRNDLPRVSYSTALDIYV
AICFVFVLATIIQFAAVHYYTKFGCGEGPQLARYIAKEVELEEILEEQAGEEAQRSNDVA
KENGHKRQILIKNGKPRETALFKCWNCFFGTKNVPHTSMLGNVLGLNSVSRIDKLSRIIF
PVVFFAFNILYWCIYLSDTSQLL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctgtaagtgagaggagtatggattactcgatggattgttatttccgacaactc
tggatagacgagagacttgcattgaatgtttcacttcccaatatttcattaaatatcaaa
gtcttagagcgtctttggtatcctgatacggtatttctaaatggcgggaaatcgtttgtc
cacatggtgccaatgccaaacaaattctttcgtattaacaaagacggctctgtgttgtac
tcccaaagattgacaataaaagcaacatgtaaaatgcgccttgagaagtaccctctagat
tcacaaaagtgtcaactccttgttggaagcttcgcctatactatagatgatgttatatac
gagtggagatttggtcgccacaactcagttgagatagcagcagatatgactttgtcacaa
tttgatttactgcaagcaccatgctttaattcgacctcaattcttcgaggagctccgcat
tcggttttgtcaatacatttttatctcagacgtcatatggggttttttcttatcaatgta
tatgtgccatgctgccttcttgttgtactatcttgggtttctttctggataaacagagag
gcaacatccgacagaattgctcttggtacaatgacagtgctcacgatgacgtttataggt
ttggacaatcgtaacgaccttccccgggtgtcctactcgacagcactcgatatctatgtc
gctatatgttttgtgtttgtacttgctacaatcatacaatttgctgccgtccattattac
acaaagttcggatgtggtgaaggtcctcagctggccaggtatattgctaaagaggtggaa
cttgaggaaatacttgaagagcaggctggtgaagaagcacaaaggagtaatgatgtagcg
aaagaaaacggacataaacgacagatattgattaaaaatggtaaaccaagagagacggct
ttatttaagtgttggaactgtttcttcggaacgaaaaatgtgcctcatacaagcatgctg
ggcaatgttttaggactgaacagtgttagtcggattgataaattgtctagaattattttc
cctgtagtgttctttgcatttaacattctttactggtgtatatatctttcagatacttca
caattattatag
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