Ruditapes philippinarum (Manila clam): 132743084
Help
Entry
132743084 CDS
T09557
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132743084
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132743084
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132743084
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Atypical E3
132743084
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
132743084
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
C1_1
zf_Tbcl_Rhp7
Adeno_E1B_19K
Motif
Other DBs
NCBI-GeneID:
132743084
NCBI-ProteinID:
XP_060587577
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MAYKDTHRMFLQSFMSRGILNANDVFKLLESCCDKYGEVIEDKIQHLLRYLHSINDVIRV
FGMEIRNVIDEVDSTKHYGLVNTTETSITLLASSYTENELEFFKKLISQIVLSDNGSIGS
MAAVNIVDSLTKKMSKSDAEYLLERLIRDRWIGKSENGHVYIGTRGVLELEQYILEMFET
AVRCNMCKKLCVQGESCSNCEVKIHYHCASKFFKDGSMMKCPECQNPWTITSNSASTSSS
AAVGGASTESSPPSSSAASSSQSRKRKARHE
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcctacaaagatactcatcgtatgtttctacagtctttcatgtccaggggaatctta
aatgcaaatgatgtcttcaaattgctagaaagttgctgtgacaagtatggagaggtgatt
gaagataaaatacagcatttgttgagatatcttcacagcatcaatgatgttataagagtt
tttgggatggaaatacgaaacgtaattgatgaagtggatagtaccaagcattatggtctt
gttaacaccacagaaaccagcattaccctcttagcttcatcatacaccgaaaacgaattg
gaatttttcaagaaattaataagtcagattgtattatcagacaatggttccataggatct
atggctgccgttaacattgttgacagtttaacaaagaaaatgtccaaaagtgacgcagaa
tatctattggaaagattgataagagatagatggattggaaagtcagaaaatggtcatgtg
tacattggcaccagaggtgtcttggaactagagcagtatatactagaaatgtttgaaact
gcagtgaggtgtaatatgtgcaagaaactgtgtgttcagggtgaaagttgcagcaattgt
gaagtaaagatacattatcattgtgcttctaaattctttaaagatggctccatgatgaaa
tgtccggagtgtcaaaatccatggacaattacaagtaattctgcatcaacatcatcatca
gctgcagtgggaggagcttctactgaatcatcacccccatcatcatctgcagcatcatca
tcacagtcaaggaagagaaaagctagacatgaatga
DBGET
integrated database retrieval system
