Ruditapes philippinarum (Manila clam): 132743126
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Entry
132743126 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC132743126
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132743126
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132743126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR55
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
132743126
NCBI-ProteinID:
XP_060587631
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MSACTRNTFITRRDRETGCKLRAGDIARSNLSLSSNIKAHHTWDPRKTISDTDHGGIFNF
DFSKDGSILGAACERKSVLLFDPFNGKKVATKLNAHTDCVNCVKFLDDRLFATCSDDTTV
ALWDTRYLKHNVQTFRGHSNWVKNIEYDSKQGILLTSGFDGCIYTWNINRYSTEESSNKV
FYTSGLMRSKLSPDFSKLIISTHEGYIIVVHNLDLSTLGEDLKGFKPNMYRLMQRSQTPL
RIGLMYNHVFEQERNRVQFIADWPTGNDANIISSLQVHPQGWCMLSRNTDSSENTEWTCV
HELLDDYPEKKAAKRPWEMERVTPHTSSAYCTSTNTPAYSSLAPSNQSRTRNSSSSENPS
ENAMNQSSSNNISGNSSTRELAGNSSNQALRSSQARQLPGNQGSRGSADTNSSIDRPASR
DSISPDSNDGIFTPAPVEITRGSQNETNASPPERRAATSPQVSGPIHNSLIQIRRGARQE
DGSFSFSISVHTSSGRTIEFNQDDLASDDEESGVRIERIIPNNNADLPHVNLSSGNTTRS
IGDNRSEQQGNSASGATSGRDVSPNERTRTETATDQTQDEDTSTNVIGESATVEEVLSVQ
SVTNNDHSVGPESDSDSDYDHNLPGSLIDHTIDDYSDLENESDHDLIEEDRYEFSNDSDD
EAGAVGSSFDIAYTNEETGGEINLTIQDSGGATANVESDRLFRNSGLPRIRRAGSSRSIR
ANSSNSRSSNTSSSGYSSSVNTNAQNSSPQIANSLDSHSRNNSFMFVLESNTGNRRRRIL
NLSYLDSYSEVENNQLQKNIHWNRKKLLGYTEECNVGRGFIKEVGFSHDGRLISSPFGFG
LRIFAFDSLCNELCDCIPSSPVKLYEVTCSLAHVNCVVATKFSPVHNLIVSGCLDGKIAF
HQPVL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgtgcacgaggaatacgttcattaccaggagagacagagagaccggctgcaaa
ttacgagcaggtgacatagcgagatcaaatctaagtttatcttcaaacatcaaagcccat
cacacctgggatcccaggaaaacaatcagtgatactgatcacggtggaattttcaacttc
gacttttcaaaagatggatcaatacttggagctgcctgtgaaaggaaaagtgtactattg
tttgatccattcaatggtaagaaggtggccaccaaattaaatgcccatacagactgtgtg
aactgcgtaaaatttttagatgatcgtttatttgcaacatgttcagatgacacgacagtt
gcattatgggacacccgctacctaaaacataatgttcaaacatttcgtggtcactcaaac
tgggtcaagaacatagaatacgattctaagcagggtatattattgacatctgggtttgat
ggctgtatttatacatggaatattaacaggtacagtactgaggagtcatcaaacaaagtg
ttttacaccagtggtctaatgaggtcaaaattgtctcccgatttctctaaactcatcata
tccacacatgagggctacataatagttgtacataaccttgatctctctacattgggtgaa
gacctaaaggggttcaagccaaacatgtatcggttaatgcagcgaagccagacaccgttg
agaattggtctcatgtacaatcacgtgtttgaacaagagaggaacagggtacagtttata
gctgactggccaacaggaaatgatgccaatatcatatcatctttacaggttcatccacaa
ggctggtgcatgctgtccagaaatacagactctagtgaaaatacagagtggacatgtgtg
catgaactactagatgactatcctgagaaaaaagcggcaaaacgtccgtgggagatggaa
cgtgttactcctcatacatcgtcagcttattgtacttctacaaacactcctgcctactca
tcgttagccccatcaaatcaatcacggacacgaaattcttcatccagtgaaaatccatca
gaaaatgccatgaatcagtcgtcatcaaataacattagtggaaattcatccactcgtgaa
ctagctggaaactcaagtaaccaagcgttaaggagttctcaggcacgtcaactaccaggt
aaccaaggaagtcgaggatcagcagatacaaacagttccattgaccgacctgccagtaga
gattcaatttcaccagattcaaatgatggaatatttacaccagcccctgttgaaatcaca
agaggctctcagaatgaaactaatgcaagtcccccagaaagacgtgctgccacatctcct
caggtttcagggccaatacataattcattgatacaaatacgtcgtggggccaggcaagaa
gacgggagcttttctttttctatttctgtacatacctctagtggtaggaccattgaattt
aaccaggatgatttggcatcagatgatgaagaatcaggagttaggattgaaagaattatt
cctaacaataatgcagatcttccgcatgtgaatctcagttcgggtaacacaactcgatca
ataggtgataatagatctgaacagcaaggaaactctgcatctggagcaacttcagggaga
gatgtttcacctaatgaaagaactagaacagaaacagcaactgaccaaacgcaagacgaa
gacactagtacaaatgtcattggagagtccgcaactgtagaagaggtcttgtcagtgcaa
tcagtaacaaataatgatcattctgttggaccagaaagcgatagtgacagcgattatgat
cataatttaccaggctcgctcattgatcacactatagatgattattcagacttagaaaac
gaaagtgaccatgatctaatagaggaagatagatacgagttcagtaatgactctgatgat
gaggctggagcagttggatccagctttgacattgcatataccaatgaagaaactggtgga
gaaataaaccttactattcaagatagtggtggagccacagctaatgttgaatcggatcgt
ttattcagaaactcaggtcttccgcgaattagacgcgctggcagctctagaagcataaga
gcaaatagcagcaattctcgtagctcgaatacaagttcatctggctattccagttctgtg
aacacaaacgcgcaaaattctagtccacaaattgccaattcacttgattctcattctaga
aataactcgttcatgtttgttcttgaatccaatacagggaatcgcaggagacgaattctt
aatcttagttaccttgacagttattctgaggttgagaataatcaattacaaaaaaacatt
cattggaacaggaaaaaactgttggggtatacagaagaatgcaatgttgggcggggcttt
atcaaagaggttggattcagtcatgatgggaggctgataagctccccttttggttttggg
ttaaggatttttgccttcgattccctttgcaatgagttatgtgactgtattccatcaagt
cctgtgaagttatatgaagtgacctgttctctggctcatgtgaactgtgtagtggctacc
aaattttcaccggtacataatttaattgtgtcagggtgtttagatggaaagatagccttc
catcagccagttctgtga
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