Ruditapes philippinarum (Manila clam): 132743281 Help Entry 132743281         CDS       T09557                                  Name (RefSeq) F-box DNA helicase 1-like   KO K10300   F-box DNA helicase 1 [EC:5.6.2.4] Organism rphi  Ruditapes philippinarum (Manila clam) Brite KEGG Orthology (KO) [BR:rphi00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:rphi04121]     132743281 Enzymes [BR:rphi01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      132743281 Ubiquitin system [BR:rphi04121]  Ubiquitin ligases (E3)   Multi subunit type E3    SCF complex     Target recognizing subunit (F-box)      132743281 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UvrD-helicase AAA_19 F-box-like F-box AAA_22 Viral_helicase1 AAA_30 ResIII Motif Other DBs NCBI-GeneID:  132743281 NCBI-ProteinID:  XP_060587800 LinkDB All DBs Position Unknown AA seq 1053 aa AA seqDB search MSLERSQTSKRKRLHMDSEACLDHVNTDEGALPLSSPHLVSQKGANIDVNRGLHPVVRNR KRKFESFHEEDLTNDKSNSNKKEIMQFNTVTVNSSQGFVSASKMYDINHKQNVQSVVKPK NNIDMFLQRSQSEKKGKIKQIPNQGSLRSFVSSSTPSAPSCSHHSSKKTKEETSVNAQES PSRTVMYSPIKKLSPKDSMSCIYISDDSPCSSQEFSSQKSNMSENPVIKQLFQAAKDFDP KVKTKGKKSKPVSSPFLNASKNEGAKYFESDSFDINTAFDSDMDDSSSVDSKNSISESKR KKTESDTYGLLGTGSYPKEEKINYFERLPPEVLENIFCQLPLLDLCLNSNRVCLQWNDII SDEKFVPWKKLYHKLKSEDEASKEFIQSTMNKHEMKHPPMYLLSLIRYMKTFKPITAGNM LQCLQKHKKYCWAKDLIDERLQDCKTHEEPNPWSVITILVLVAHNVYDIQEIIQCLSVSS SQCTSKEIIECLYCIATFLFAFKLAKPCDVWNGMHYRLFYALYLFENASSSSCADLHSIM SESKGGQQSLVKYSSGTDSVRLTHEQLRIVKYPAGKYEIIKIVAFAGTGKTTTLVRYTQL RPDKKFLLVVYNKSVCEYAKTKFPRNVECRTGHSLAFQSFGRRYRHKLFQLKVYTLTQTL QARKGENLFLQAKFTMTTIENFLASDDITIDIHHVPDTRFNEKTGFKETIDLPTKRLYVR DALFIWQKMQDPNDKKIGMSHDGYLKLYQLSQPVLRGYDCLLIDEAQDLTPAITDILLRQ RQGKILVGDPHQQIYSFRGAVNAMNRINADTIFYLTQSFRFGPEIAQVAMSCLEVLKKEK KKTLVGSGKKSCVNGEKVGQLAIISRCNFTVFSEAVKKCCYSDQQCKVAFVGGTQNFGFK MLMEMYALTLSENERHKEGYEIQNPLIKMFRRFQDLDNFATKSMDNELLGKIKIVKTYHH NLPSHIRMIESKCVSDERRADYVFSTAHKSKGLEFSSVRVTDDFLMDPSRGIMVAGVPAD MLEDDEDVLEDMLGRDMDRAIMGIAMNARGSNN NT seq 3160 nt NT seq  +upstreamnt  +downstreamnt atgagtttagagagatcacagacatcaaaacgcaaaagattacacatggattcagaagcc tgcttggatcatgttaatacggacgagggagcattacccttgtccagtccccatttggtt tcccaaaagggagccaacatagatgtgaatagaggattgcaccctgtagttcgaaacaga aaacgtaaatttgaaagttttcatgaagaagaccttacgaatgataaatccaatagtaac aaaaaagaaataatgcaattcaatactgttactgttaattcctcccaaggttttgtgtct gcatcaaaaatgtatgatataaatcataaacaaaatgttcagtctgtagtcaagccaaag aacaatatagatatgtttcttcaaagatctcagtctgaaaagaaaggaaaaatcaaacaa ataccaaatcaaggcagtttaagaagttttgtgtcttccagcactccatcagcaccatca tgttcacaccactcttcaaaaaagactaaagaagaaacatcagttaatgctcaagaatca ccttcaaggactgtgatgtactcgccaattaagaaactctcaccaaaagatagcatgtca tgtatatatatcagtgatgacagtccctgctcatcacaggagtttagtagccagaaatca aacatgtctgaaaatcctgtgatcaaacagttgtttcaagcagctaaagactttgatcca aaggttaaaactaaaggcaagaaatctaaaccagtcagctctccatttttaaatgcatct aaaaatgaaggtgcgaaatattttgaaagtgatagttttgacattaacactgcatttgat tcagatatggatgatagttcttctgtagacagtaagaatagtatttctgaaagcaaaaga aagaaaactgagtctgatacatatggacttcttggtacaggatcatatcctaaagaggaa aagataaattactttgagagacttcctcctgaagttcttgaaaatattttttgtcaactt cccttactagacttgtgcttgaacagtaacagggtgtgtttgcaatggaatgatattatt tcagatgaaaagtttgttccatggaagaagttgtatcataaattgaagtctgaagatgaa gccagcaaagaatttattcagagtacaatgaataaacatgagatgaagcatcctcctatg tatttgttgtctttaatcaggtatatgaaaacttttaagccaatcacagctgggaatatg ttacagtgtcttcagaagcataagaagtactgttgggccaaagatctcatagatgaaaga ttgcaggactgcaaaactcatgaagaaccaaacccatggtcagtgataaccatactagtt ctggtggctcacaatgtgtatgatatacaagagattatacaatgtctttccgtcagttcg tctcagtgtacgtccaaggaaatcatagaatgcctgtactgcattgcaaccttcctgttt gcttttaaattggcaaaaccctgtgatgtctggaatggaatgcattacagattgttctat gctttatacttgtttgagaatgcctcatcatcgagttgtgctgatcttcattcgataatg tccgagagcaagggaggtcaacagtctttagttaaatacagctctggaacagacagtgtt aggcttacacatgagcagttgcgtattgtaaaataccctgcaggcaaatacgaaataatc aaaattgtagcatttgcagggacagggaaaacaacaactctagtgaggtacacacaactt cggcctgacaaaaaatttcttcttgtagtctataacaagtcagtctgtgaatatgcaaaa acaaagttcccaagaaatgttgaatgcaggactggacattctttagctttccagagcttt gggagaaggtatcggcacaaacttttccagctaaaagtttatacactaacccaaacgtta caagctaggaagggagagaacctgtttttgcaagccaaattcaccatgacaaccattgaa aacttccttgcgtccgacgatattactatagatattcatcatgtcccagatactcgattt aacgagaaaacaggttttaaggagaccatagatctacctacaaaaaggttatatgtgaga gatgctttgttcatttggcagaaaatgcaagacccaaatgataagaaaattggtatgtca catgacggctatttaaaactgtaccagttatcacaaccagtactgagagggtatgactgt ttactaatagatgaagcccaggatctcacaccagctataacagatatactactgcgtcag agacagggcaagatcctggttggagacccgcaccagcagatctactcattccgcggtgcc gttaatgccatgaaccggattaatgccgacaccattttctatctcacacagtctttcaga tttgggccggagattgcacaggtggccatgtcttgtctagaagtacttaagaaagaaaag aagaagactttagttgggagtggcaaaaagagttgtgtgaatggagagaaagtaggacag cttgccatcattagtagatgtaactttacagtattcagtgaggcagtgaagaaatgttgc tattctgatcagcagtgcaaagtagcctttgtagggggtacacaaaatttcgggtttaaa atgctgatggaaatgtatgctttaacactgtcagaaaatgaaaggcataaagaaggatac gagattcagaaccctctgattaagatgtttagaagatttcaagacctcgacaattttgct actaagtctatggacaatgaactccttggcaagattaagattgtgaagacgtaccatcac aacctgccgtcacatatccgtatgatagagagcaaatgtgtctcggatgaaagacgagca gattatgtgttcagtacggcccacaaatctaaaggactagagttcagctctgtccgtgtg acagatgactttcttatggaccccagtagaggaataatggtggcaggggttccagcagac atgctggaagatgatgaggatgtgttggaggacatgttgggtagagacatggacagagca ataatggggattgcgatgaatgctagaggatcaaataatg

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