Ruditapes philippinarum (Manila clam): 132743355
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Entry
132743355 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF1-like
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132743355
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132743355
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132743355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAD_SRA
TTD
ubiquitin
PHD
Rad60-SLD
zf-RING_2
zf-C3HC4
zf-RING_10
zf-C3HC4_2
zf-RING_5
zf-RING_6
zf-RING_UBOX
UBR4
Motif
Other DBs
NCBI-GeneID:
132743355
NCBI-ProteinID:
XP_060587856
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MWIQVRTFDGSKSLQVDNLSKLTKIEDLRDRLVEHFDAPVDSQRLFYRGKQLVDGHTLFD
YSVGLNDLIQLMIKAPPPAQDTKETEKDGDTRENGSDKENEPEQSEEKEKSDIDLQDSTY
KIGDVIDARDIAMGAWFESTIMKVTKSTSKPDKSEKQVDSIKPVLSESSLKTADNKAENK
NNTPKKGRENSSKAKDVNENVKSDKSEAMDTDDTPTSDSKTSGIKTYDKLFDNVLKDDGF
VYHIVYEGYDEDDHVQLTCKDIRPRARSNIKFSDVKVGSAVMANYNIEEPDERGFWYDCV
ITDKTDTRTVKKLSATVYFGPDLSPLENCNLLFVDEIFAVEVAGTQLTAEDLAANPSMSP
VKRTNKPDCDHCLDNPKRKCKHCACCVCGGKHEPENQIICDECNSAYHLQCMDPPLDKIP
EDDEWYCPKCKLDDSIIVKAGEKLKESKKKSKMASKQGNSSRDWGRGMACVGRQKVCSVV
PMNHFGPIPGVEVGTMWKFRVQVSEAGVHRPHVAGIAGREKDGAYSIVLSGGYEDDTDNG
ESFFYTGSGGRDLSGNKRTAEQSCDQTLTRMNRALAINCNAPLDNKNGSTSKDWRKGKPV
RVVRNCKLAKHSEYAPEEGNRYDGIYKIVKYWPQKGQSGFLVWRYLMQRDDPTPAPWTAE
GKKRTKQLGLVMQYPEGYLEAQALKEKEKEESDTPKGKGKGKRKRNNSEENEENSPSKKV
KKVAAYKIDDAVSKLIKQDKENKKLWDEAREFTKEGGQKFLQKIEELFTCICCQDLTFKP
VTTTCQHNMCKTCIQRSFKADVTTCPACRTELGKDYKMPVNTVLSDILLKFFPGYDAGR
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccaagtaagaaccttcgatggatcaaaatcattgcaagttgacaatttgtca
aagctgacgaagatcgaagatttacgagatcgtctagtagaacattttgacgcacccgtt
gacagtcaacgactgttttataggggaaaacagcttgtagatgggcacacactatttgac
tacagtgttggactcaatgacctcatccagttgatgatcaaagctcctcctcctgctcag
gacacaaaagagaccgaaaaagatggtgacactagagaaaatggatcagataaagaaaat
gagccggaacaatcggaagaaaaagagaaaagtgatatagatctgcaagacagcacatac
aagattggagatgtgatagatgcacgtgatattgctatgggtgcatggttcgaatcaaca
attatgaaggtcaccaagtctacctcaaagccagataagtccgagaaacaagttgacagt
ataaaaccagtcttgtcagaaagcagtttgaaaacggcagacaacaaagctgaaaataaa
aacaatacacccaaaaaggggcgtgaaaattcttccaaagcaaaggatgttaatgaaaac
gtgaaaagtgataaatccgaagcaatggatactgatgacacgcctactagtgatagtaaa
acctcaggaataaagacatatgataaactatttgacaatgtgttgaaggatgatggcttt
gtgtaccatattgtatatgaaggttatgatgaagatgatcatgtgcagcttacgtgtaaa
gacataagacctcgtgctcgttctaatattaagttttcagacgtaaaggtagggagtgca
gtgatggctaattataacatagaagagccagatgaacgagggttttggtatgactgtgtt
ataacagacaaaactgacacaaggacagtaaagaaattgtcagctactgtgtattttggg
cctgacctttcacctttagaaaattgtaacctattatttgttgatgaaatttttgctgtg
gaagtagctggtacccagctaactgctgaagacttagctgccaacccaagcatgtcacct
gtaaaaagaacaaacaagcccgactgtgatcactgtctggacaaccctaagaggaaatgt
aaacattgtgcttgctgcgtgtgcggagggaaacacgagccagagaatcaaataatatgt
gatgagtgtaacagtgcatatcatttacagtgtatggacccacctctagacaaaattcca
gaagatgatgaatggtattgtccaaagtgcaagctggatgattcaataattgtaaaagca
ggagaaaaactgaaagaaagtaaaaagaaatcaaagatggcttctaaacagggaaacagt
agcagggattggggtcggggtatggcttgtgtaggaaggcagaaagtgtgttcagttgtt
ccaatgaatcattttggcccaataccaggtgttgaagtgggaacaatgtggaaattcagg
gtgcaggtgagtgaagctggtgtacacagacctcatgtagcaggcattgctggtagagaa
aaagatggggcatattccattgtgttatctggtggatatgaagatgatactgataatggt
gagtcgttcttttacactggtagtggagggcgtgacttgtcaggaaataaacgaacagca
gaacaatcatgcgaccaaacccttactagaatgaacagagctcttgcaatcaattgcaat
gcacctttagacaataaaaatggaagtacatcaaaagattggaggaaaggcaaacctgtg
agggtagtgagaaactgtaagctggctaaacactctgaatatgctcctgaagagggaaac
agatacgatggcatttataagatagtaaagtactggccacaaaagggtcaatctggtttc
ttagtctggcgttatttaatgcaaagagatgatccaaccccggctccatggactgctgaa
ggcaagaaaagaacaaagcagcttggattagttatgcagtatccagaaggctacctagag
gcccaggccctgaaagaaaaagaaaaggaagagtctgatactcctaaaggtaaaggcaag
gggaaacgtaaacgtaataacagcgaggaaaatgaagaaaacagtccaagcaagaaggtg
aagaaagttgctgcatacaagattgacgatgctgtatctaaactgattaaacaagacaaa
gagaacaagaaactctgggatgaagctcgtgaatttacaaaagagggtggacagaaattt
ttacagaaaattgaagagttatttacatgtatctgttgtcaggacttgacattcaaaccc
gttacaacaacttgtcaacacaatatgtgcaagacgtgtattcagcgatcatttaaagca
gacgtgactacctgtccagcttgtagaacagagttaggcaaagactataaaatgcccgtt
aacacagttctctccgatattcttcttaaattcttcccgggatatgatgctggcagatag
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integrated database retrieval system
