Ruditapes philippinarum (Manila clam): 132743502
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Entry
132743502 CDS
T09557
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2-like
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132743502
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
132743502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
AAA_16
eIF2A
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
NACHT
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
DUF4062
Beta-prop_IFT122_1st
ATPase_2
APAF1_C
NPHP3_N
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_NWD2_C
AAA
nSTAND1
NB-ARC
Beta-prop_IFT140_2nd
PD40
KNTC1_N
AAA_22
NBCH_WD40
PEP5_VPS11_N
SAM_decarbox
Bac_DnaA
NPHP3
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
132743502
NCBI-ProteinID:
XP_060588011
LinkDB
All DBs
Position
Unknown
AA seq
1602 aa
AA seq
DB search
MGSGSSKNDKKNGNGITPAVKTEIHTPVKEQPAQEVRKEEMFRTFKAEQNSPSATKTNKS
GNANEAELPWKQALDKVEAMEIWEGKNREERSPWKEYLQKADDILKKPRKAIPKEIVSQI
LQGDMTAVDISSVPTAQPKVVVFVSSTFTDTKAERNHLMKDVYPYLRSLCRRLGVEFGTV
DMRWGVTKEATLDHSTVDMCVNEIHRCVKDSVGPAFLCLMGHKYGYRPLPAQIEQSELDT
LLHHLQQAGQDTSMIKSFYSLDNNAVPSEFVLKPQTEDNKTWWDDVETIQNQLREASAAC
FGKENAKYDKYHISVTETEIHEGVFNNQNAKDQAIFIRRDLARFDSEFHKDRKILDLVGK
EVDEYAHDKLAELREKKITSKVHPDTVRDMKYEEGKPTQITDQIRDLCEHVCKTMADGIL
ESYEKRLHVEEDRVFQEALQHRTHANEKAGLFVGREHEIGMISDYLHSESLTPLVVHGQS
GCGKTALMAVAARKAKDVFHNAVVVLRFLGTTGQTASARLLLLNVCAQITRVFDKDLSAI
PTSYKDLVKYFRTCLAFATSDKPIIVFLDSLDQLNNEDFGQNLAWLSLSEDLPPNVRLVV
SSLPTRSLDILKSHLKDAVFVEVKQLSINEGPEILNKMLEAKHRRVTESQKSLIINAFKK
CPLPLFLRLVVDIAERWKSFEDVDSDALADDMPGLITKLFDRLESRYGDMFVHHSLGYIT
ASKNGLSLAELEDILSCDDEVLDSIFKWWIPPIRRMPPLLWARVRNELGIYLSEKGTDGI
SAYGWYHRQFWETAEKRYIQRPYNKDKQNFGEKAHTAIANYFEGKWDNGKLYTHKGETKN
EDRKIAKQPLVLGGLNRETKRQLNRRKLTELPYHLIQLKEWDRFKKLVLDLEYVEAKFEA
GDGYNCLSELIEATKRSACEDIKRITRFVGSNLGFLIREPSGVYQMALQQARGSCIRELL
DVLNKESLPMPLMVNLHESDYDDPCEMTMHGHTATLRCCNFSPTGDLILSSADDCTMRVW
DATTGAEIVTITSLPEPIFPDESEGMQLMLHPVNPSCFSRTGENIANGTELGEVMLWDKS
GVQLCSQSTGNKAVVYIQFSPDNRHIATAFKNSVLSIWSSADLNLVKTVNIDWYDLTCLD
FSRDGKKLAVMSTRGLILLDTNEYNVTSKTPGSCYTNLCCAFHPTGSWVMTGGDDSCVGI
WNAETGAFISKMRKHTAWIWSIQFTPDGKHMFTGSSDRSMKVWQMGESRWDVIATVGGHS
HRVSMISITGSGDKIVTSSLDRSLKVWDTKTLLQGAVPPVGSGHYLTCMTSPNGALVAIS
QGWSRVCGILETGNPDQEPKKYTEAHTGFIKMVQFNHDGSCLYVLDHGHCGTYDAGSEKN
ARIEICPVSDDGESTYIDVESPYCFSLTNKHVVVGTFSGYIHMFDLESDKEIFKWKSRST
GTITRVAAWNGGSRYLVAACFGQVCQIWEFNGSSVNLLADLTENDSDISEVSFSPDGRYL
VNGGNSGKLYIWDTSNKKVTLYKVATEHASYIKDVRFSTSGNYLATSAGLTMRMWDVKNN
FNLFSTYYAPVNCASFLNDSVVIVGEATGNRKFLQFRKLVSN
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaggaagctcgaaaaatgataagaaaaatggaaatggaattacgcctgcggta
aagacagaaattcatacaccggtcaaagaacaaccagcacaggaagttcgaaaagaagaa
atgttccggacatttaaagcagaacaaaactcgccgtcagcaacaaaaacgaataaatcc
ggtaatgcgaatgaagctgaattaccttggaaacaagccttggataaagtagaagcgatg
gagatatgggagggaaaaaaccgggaagaaaggagtccatggaaagaatatttacagaaa
gcagacgacattttaaagaaaccgcgtaaagcgattcctaaggagatagtgagtcagatc
cttcaaggtgacatgacggccgtagatatatccagcgtgccgacagcccagccaaaggtc
gttgtatttgtcagttcaacttttacagacaccaaagctgagcgaaaccatcttatgaaa
gatgtttatccatatttaagaagtttatgcaggcgacttggtgtcgaatttggtacagtg
gacatgaggtggggagtgacaaaagaggccacgctggatcacagtacagtagatatgtgc
gtcaacgaaatacatagatgtgttaaagacagtgttggtccggcttttctgtgcctgatg
ggtcacaagtatggatatagacctctgcctgcacaaatagagcaatcggagttagatact
cttctacatcatctgcaacaggctgggcaagatacttcgatgattaaaagcttctattca
ctcgacaataatgcggtcccgtctgaatttgtactaaaacctcaaacggaagacaataaa
acatggtgggacgacgttgaaacgattcagaatcagctgcgagaagcctccgccgcttgc
tttggcaaagaaaacgcgaaatatgacaaataccatatatctgtgaccgaaactgaaata
catgagggtgtatttaacaatcaaaacgctaaagatcaagctattttcatacgtcgagat
ctcgcgagatttgattcggaatttcacaaagatcgtaaaatccttgatcttgtagggaaa
gaagttgacgaatatgcccatgacaaacttgcagaactcagggaaaagaagataaccagt
aaggttcatcccgacactgtaagagatatgaaatatgaagaaggaaaaccaacacagatt
actgatcaaataagagatttgtgtgagcatgtttgtaaaactatggctgatggaattctg
gaaagctacgaaaagcggcttcatgttgaagaggatagagtatttcaagaagcattgcaa
cacagaacccatgcaaacgagaaagctggtttatttgttgggagggaacacgaaattgga
atgatatcagattatcttcactcagagtcattaacgccgcttgttgttcacggtcaatct
ggttgtgggaaaacggcattaatggccgttgctgcaagaaaagcaaaagacgtttttcac
aatgctgtagtagttcttcgtttcctgggtacaaccggacaaaccgcatccgctcggcta
ctactgctgaacgtgtgtgcgcagatcactcgtgttttcgacaaagatttgtcagccata
cctacatcttacaaagacctcgtgaaatacttccgaacctgccttgcatttgctacatcg
gataaacctatcatagtgtttcttgattcattagaccagttgaataacgaagactttgga
caaaatttagcgtggctttcgttatccgaagatttgcctccgaatgttagactggtggta
tcatctttaccaacccgttctttagatattcttaaatcccatctgaaggacgctgtattt
gttgaagttaagcaattgtccataaatgaaggacctgaaattttaaacaaaatgctcgaa
gcgaaacatcgccgtgtgactgaatctcagaaatcacttatcattaatgctttcaagaag
tgtccattgcctttgtttttgcgtctggttgttgacattgctgaacgttggaaatcgttt
gaagacgtagactctgatgctttagcagacgacatgcccggcctgattactaagttgttt
gatcgactagaatcccgttatggtgacatgtttgtgcaccattctctaggttacataact
gcttctaagaatggtttatcacttgctgagctagaggacatactatcatgtgatgacgaa
gttttggacagtattttcaagtggtggataccaccaattaggcgtatgcctccacttcta
tgggcgagggtaagaaacgagcttggcatttatctctcagaaaaaggcaccgatggaata
agcgcctatggatggtaccataggcagttctgggaaacagccgagaaaagatacatccaa
aggccttacaataaagataaacaaaactttggcgaaaaagcccacacagctattgcaaac
tactttgaaggtaaatgggataacgggaaactgtatactcacaaaggagagacgaaaaat
gaagatagaaaaatagctaaacagcctcttgtcttgggtggactaaatcgtgagacgaaa
cgacagcttaacaggaggaaactcacagagctgccatatcatcttatacaactgaaagaa
tgggaccggtttaaaaagctcgtattagatctagagtatgtcgaggcaaagtttgaagct
ggtgacggttacaattgtcttagtgaacttatagaagctacaaaacgatctgcgtgtgaa
gatatcaagagaataactcggtttgttggatcaaatctagggtttttgataagagaaccg
tccggggtttatcagatggctttacagcaggcaaggggaagttgcatacgagaactgttg
gacgtgttgaacaaggaaagtttaccaatgcctctgatggtaaatctacacgaatctgac
tatgacgacccttgtgaaatgaccatgcatggacataccgcgacgcttcgatgctgcaac
ttttcacctacaggggatcttattctatcttcggctgacgactgtactatgcgggtctgg
gatgcaacaacaggggctgagatagtgactattacgtcacttccggaaccaatatttccg
gatgaaagtgaaggcatgcagctgatgttacatccagtaaatccttcgtgtttctcacgc
actggtgaaaatatagcaaatggtacagagttaggtgaagtcatgctttgggataaatcc
ggtgttcagttatgctctcagagcacgggtaataaggcggtggtgtatatacaattctcc
ccagacaatcgtcacatcgccacggccttcaaaaacagtgttctctcaatttggtcgtct
gcagacttgaatctcgtgaaaacggttaatatcgactggtatgatttgacatgtctggac
ttttctagggacggaaagaaactggccgtgatgagcacgagaggacttattttgttggat
acgaacgagtacaatgtgacatcaaagacaccaggaagttgctataccaatctttgctgt
gcttttcatccaacgggctcatgggtaatgactggcggagatgacagctgcgtgggtata
tggaacgccgaaaccggcgcctttatctcaaaaatgagaaaacacactgcttggatttgg
tccatacaattcacccctgacggtaaacatatgtttacaggctcctccgatagatcaatg
aaagtatggcagatgggagaatctcgttgggatgtcatagcaacagtagggggtcactca
cacagggtcagcatgatttcaattacaggaagtggtgataaaattgtcacctcttcatta
gacagatcactaaaggtatgggacacaaaaactctactacaaggcgctgtgccccctgtc
ggaagcggtcattacctcacatgtatgacgtcaccaaatggagcattggttgcaatttcc
caaggttggagcagggtatgtgggatactggagacaggaaatcctgatcaggaaccaaag
aagtataccgaggctcatacagggtttataaaaatggtacagttcaaccatgatggcagt
tgcttgtatgtgcttgaccatggacattgtggaacatacgatgccggatcagaaaagaat
gcccggatagagatttgcccggtatcagatgatggcgaaagcacatatatagacgtagaa
tcaccgtactgcttctctctaacgaacaaacacgtcgtcgtcggaacattttccgggtat
atccacatgtttgacttagaaagcgataaagaaatattcaaatggaagtcacgaagtaca
gggactattaccagggtagcagcatggaacggaggttccagataccttgttgctgcgtgt
ttcggccaagtatgccaaatatgggaattcaacggaagtagtgtcaatctcctggccgac
ttgactgagaatgattcggatatttccgaagtttcattttcccccgacggccgatatctt
gtcaacggcggcaactctggaaaactttatatatgggatacttcaaacaaaaaagtcact
ctttataaagtggctactgagcatgcgtcatacatcaaggatgtgaggttctcaacttcc
gggaactatttagcgacgtcagcaggcctgaccatgcgcatgtgggacgtcaaaaataat
tttaatctattttcgacatattatgctcccgttaactgcgcatcatttttgaatgatagt
gtagttatcgttggtgaggctaccggaaacaggaagttcctgcaatttaggaaattggta
tcaaattga
DBGET
integrated database retrieval system
