Ruditapes philippinarum (Manila clam): 132743548
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Entry
132743548 CDS
T09557
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132743548
04121 Ubiquitin system [BR:
rphi04121
]
132743548
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
132743548
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132743548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
Motif
Other DBs
NCBI-GeneID:
132743548
NCBI-ProteinID:
XP_060588062
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MDANESLELFSHPGKKTKSLAWNYFKFRKDVNGNIQLSNAICSICKKVYRNNGNTTNLVF
HIKHEHKELIPQANEPVRDKHNMLQPKIQTAVTRQYLPHERQSCLNDLLLKLIVSKSLPL
SLISNDAFKKFVSVLEPRYTIPSKPAAIVLLDRKYSEMKLKLKNDLSLCESVALTHDGWT
SNSTQSYDTVTCHMIQTDWELKHAVLGTVKVEGMHTGENIAANIQSTLDEWNLGRPSAMT
TDNAANEQKAVRLLGFTRFGCFGHRINLVVKKAIKIPEMEDLLTKGRTLVSFFHKSSSAT
DLLVEKQKLLNPERKDHRLIMDCPTRWNSTLSMLQRLITETPYIVNMANDANLSKHASQV
IKANSYSFEDISVLECVTSILKPFEKATPNVNDNELIKNMKNTMIQELENRTQTEDLPLL
AAILNPDTKHLTFLSEEERERGRQLLKEKAEMLTVKVKNEVELDLTNKESALPPLPCLPD
TLDNVVQVDEVQEPESKRAKIKCSDSVEWLDDVCMITGESTIPKVVLVESEINKYFDIAR
KESDKSLTLLEWWKENEYQFS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaatgagagccttgaattgttttcgcatccaggaaagaaaacgaagtcactt
gcttggaactattttaaatttagaaaggatgttaatggaaatatccagctcagtaacgct
atttgcagcatttgcaagaaagtgtacaggaacaatggcaatactactaacctcgttttc
cacataaaacatgagcataaagagttgatcccacaagcaaatgaaccagtaagagataaa
cacaacatgttacagcctaaaatacaaacagcagtaactagacaatatttgccccatgaa
agacaatcgtgtttgaatgacctccttctaaaattgattgtgagcaagtcactgccattg
agtttgatatcaaatgatgccttcaagaagtttgtttcagtactggagccaagatatact
attccatctaaacctgctgcaattgtgctgttggataggaaatattcagaaatgaaactc
aagttgaaaaatgatctctcactgtgcgaatcagtagcacttacccatgatggatggaca
agcaactcaacacagagttatgacactgtgacatgccacatgatccaaacagactgggaa
ttaaaacatgctgttcttggaactgttaaggtagaaggaatgcatacaggggaaaacatc
gcagcaaatattcagtcaactctagatgaatggaacttaggtcgcccttcagccatgaca
accgacaatgctgccaatgaacagaaagctgtccgtcttttgggttttacgcgctttggc
tgctttggccataggatcaatctggttgttaaaaaagcaataaaaattccagaaatggaa
gacttgttgacaaaaggaaggactcttgtttcttttttccataaatcatcttctgctact
gacttgcttgtggaaaaacaaaagttattaaacccagagcgaaaagatcataggttaatc
atggactgtcccacaagatggaatagcacattatctatgttacagcgtttgattacagaa
accccttacatagttaacatggcaaatgacgcaaatttgtcaaaacatgcatctcaagta
ataaaggcaaacagttacagctttgaagatatatcagttctagaatgtgttactagtatt
ctcaaaccttttgaaaaggcaacaccgaatgtaaatgacaatgaactcattaaaaacatg
aaaaacaccatgatacaggagcttgaaaacagaactcagacagaagatctaccactactt
gctgccatacttaacccagatacaaaacatcttaccttcttatctgaggaagagcgagaa
agggggcgacaactgcttaaggaaaaggcagagatgctgacagtaaaggtgaagaatgaa
gtagaactagatttaacaaacaaggaatcagcattaccaccgttaccctgtctaccagac
acacttgataatgttgtccaggttgacgaagtacaagagccagaatccaagcgggctaag
ataaagtgttctgattctgttgaatggttagatgatgtttgcatgatcactggagaatcg
acaattcccaaagttgtgttagtcgagtcagagataaacaagtactttgatattgcgcgg
aaagaatcagataaaagtctaacattgttagaatggtggaaggaaaatgagtaccaattt
tcctag
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