Ruditapes philippinarum (Manila clam): 132743610
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Entry
132743610 CDS
T09557
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04137
Mitophagy - animal
rphi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132743610
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132743610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132743610
03009 Ribosome biogenesis [BR:
rphi03009
]
132743610
04131 Membrane trafficking [BR:
rphi04131
]
132743610
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132743610
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132743610
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132743610
Membrane trafficking [BR:
rphi04131
]
SNARE
SNARE associated proteins
Others
132743610
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132743610
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132743610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
Vps4_C
IstB_IS21
AAA_7
AAA_18
ABC_tran
DUF815
AAA_24
TsaE
NB-ARC
ResIII
SLFN-g3_helicase
Sigma54_activat
AAA_lid_PRS2_C
Viral_helicase1
NACHT
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
132743610
NCBI-ProteinID:
XP_060588124
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MALVQETEKDDLATAILRRKERPNRLLVEEAINEDNSVVSLSQKKMDELQLFRGDTVLLK
GKRRKETVCIVLSDDTVTDDKIRINRCVRNNLRVRLGDIVSIQACPDVKYGKRIHVLPID
DTVEGLTGNLFEVFLKPYFLEAYRPIKKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPVKREEEEEQLNEVGYDDIGGCRKQLAQIKEMVELPLRHPQLFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRF
GRFDREVDIGIPDATGRLEILRIHTKNMKLSDDVDLEQVASETHGHVGADLAALCSEAAL
QQIREKMDLIDLEDEHIDAEVLDSLAVNMDDFRWALSKSNPSALRETAVEVPTVTWDDVG
GLENVKRELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SVKGPEMLTMWFGESEANVREIFDKARSAAPCVLFFDELDSIAKSRGGNAGDGGGAADRV
INQLLTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIQILKAN
LKKSPVAPDVDLDYLAKVTHGFSGADLTEICQRACKLAIRQSIEAEIRQERMRQDNPDAD
MEVEEYDPVPEIVRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGGNFRFPGAAG
NQGPSQGGNPGGQFEEGDDDLYS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggctttagtgcaagaaactgaaaaagatgatttggccacagccattctcagacgtaaa
gaaaggcccaataggttgcttgttgaggaggccatcaatgaagacaattcagttgtatca
ctatcacagaaaaaaatggacgagctccagttattccgcggagacacagtattgttaaag
gggaagaggcgtaaggagacagtgtgtattgtattgtcagatgacacagtcacagatgat
aaaattagaataaacagatgtgtcagaaataatttacgtgtccgtcttggagatattgtc
agcattcaggcttgtccagatgtaaaatatggcaaaagaatacatgtacttcccatagat
gacactgtagaaggactcacaggtaatctgtttgaagtattcctgaaaccatatttcctt
gaggcatacagacctattaagaagggtgatattttccttgtacgaggtggtatgagagct
gtagaatttaaagtcgtagaaacagacccgtctccatattgtatagtagccccagataca
gtaatacattgtgagggagaaccagtcaaacgagaggaggaagaagaacaactaaatgag
gtagggtatgatgatattggaggatgtaggaaacagctcgctcaaatcaaagaaatggta
gaacttcctctcagacatccacaacttttcaaagctattggtgttaagccacctagaggt
attttattgtatgggccccctggtacaggtaaaacactgattgccagagctgtggccaat
gagacaggcgcattcttctttctcatcaatggtccagagataatgagcaagttagctgga
gaatctgagagcaacttgagaaaagcttttgaagaagcagaaaagaactccccggcaatt
attttcattgatgaattggatgctattgcaccaaagagagaaaagacacatggagaggtg
gaacgtagaattgtatcacagttgctgactttgatggacggtcttaaacagcgtgcacat
gttattgtaatggcggcaacaaataggcccaacagtattgatgccgctctaagacgattt
ggtcgttttgacagagaagtagatattggtatcccagatgcaacaggtcgtcttgaaatc
ctcagaatccacacaaagaacatgaaactgtctgatgatgtagatcttgaacaagttgcg
tcagagacccacggtcacgttggtgctgatcttgcagccctgtgttcagaggctgcatta
caacagatccgagagaagatggatctgatagatctcgaggatgagcacatagatgctgaa
gttttggattctttagctgtaaacatggatgatttcaggtgggcattgagtaagagtaac
ccaagtgctttaagagaaacagctgttgaggtacctacagttacctgggacgatgttgga
ggtttggagaatgtcaaaagagagttacaggaacttgtacagtacccagttgagcatcca
gaaaagttcttgaagtttggtatgacaccatcaaagggagtcttgttctacggtccacca
ggttgtggtaagacgctgctggctaaagccattgctaacgagtgccaggcaaactttatc
tctgtcaaaggtccagaaatgttgacaatgtggttcggtgaatcagaagctaatgtcaga
gaaatctttgataaggcaagatcagctgcaccttgtgttctcttctttgatgagttggat
tctatcgccaaatctagaggtggtaacgctggagatggaggtggcgctgcagatcgtgta
atcaatcagcttttgacagaaatggacggtatgaatgccaagaaaaatgttttcatcatt
ggtgcaacaaatagaccagacattatagatccagctattcttagacctggtcgtcttgac
cagcttatctatattccactacctgatgagaagtcaaggattcaaatcttgaaggctaac
ctaaaaaaatcaccagttgctccagatgtagatttagactacctggcaaaggtgacccac
ggtttctctggtgctgatttgacggagatttgtcagcgagcgtgtaaattggcgatccgt
cagtctattgaagccgagatcaggcaagagaggatgagacaagataacccagatgccgac
atggaggtggaagaatacgatccagttccagaaattgttcgcgctcactttgaggaggcg
atgaagtttgcccgcagatctgtgtcggacaatgacatcagaaagtatgaaatgtttgca
cagacgctgcaacagagtcgaggcttcggaggaaatttcagattcccaggagctgccggg
aaccagggaccaagtcagggaggcaacccagggggacaatttgaggagggtgatgacgat
ttatacagctaa
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integrated database retrieval system
