Ruditapes philippinarum (Manila clam): 132743678
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Entry
132743678 CDS
T09557
Name
(RefSeq) histone deacetylase 3-like
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132743678
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
132743678
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
132743678
HDAC complexes
SMART complex
132743678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
132743678
NCBI-ProteinID:
XP_060588217
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MPSSPVVAYSYDPDVGNFHYGPGHPMKPQRIALTHCLVMHYNLHKKMQVYRPYRASVHDM
CRFHSEDYIDFLMRVSPQNVQNFTKQLSMFNVGDDCPVFDGIYDFCSMYTGATLEGAVKL
NNNDCDIAVNWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQ
EAFYLTDRVMTVSFHKYGNYFFPGTGDMFELGAECGRYYSLNVPLREGMDDQMYMNVFKP
TIQQVIEFYRPTVIVLQCGADSLGSDRLGCFNLSIKGHGECVKVVKEYGLPLLVLGGGGY
TKRNVARCWTYETGVILNEEISNEIPYNEYLEYFAPDFTLHPDISTKQDNQNTKTYIDGL
KQMVSENLKQLACSPSVEMQDIPPDLLSLENTEEPNPDITNSQADVDKRIEANNEYYDGD
KDNDKENDGFIEV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtcacctgtcgttgcgtattcatatgatccagatgttggaaatttccactat
ggtccagggcatcctatgaagccacagaggattgcattaacacactgtctagtgatgcac
tataatctacacaagaagatgcaagtgtatcgtccatacagggcctcagttcatgacatg
tgtagatttcattcggaagattacattgactttctaatgagagtgtctccacagaatgta
cagaactttactaagcagctcagtatgttcaatgtgggagatgattgcccagtttttgat
gggatatatgacttttgttcaatgtatactggagccacactagaaggagctgtcaaatta
aataataatgactgtgatatagcagtgaactggtctggaggtttacatcatgccaaaaaa
tttgaagcgtcaggattttgttatgttaatgatatagttattggtatactagagttacta
aaatatcacccgcgtgttctgtatattgacatagatattcaccatggtgatggtgtacag
gaggcattttatctcactgacagagtaatgactgtctctttccataaatatggcaactac
ttcttccctgggacaggggatatgtttgagctgggagcagaatgtgggagatattattca
ttaaatgtaccactgagagaaggcatggatgaccagatgtacatgaatgtgttcaagcca
acaatacagcaagttatagaattctacagacccacagttatagtgcttcagtgtggtgca
gattctttaggcagtgacagactaggctgctttaatcttagtataaaaggacatggagag
tgcgtaaaagttgtgaaggaatatggtctaccattgttggtgcttggaggtggtgggtac
acaaagaggaatgttgctagatgctggacgtatgagacaggggttatactaaatgaggaa
atcagtaatgagataccttataatgagtaccttgaatattttgctccagactttactcta
catcctgatatatcaacaaaacaggacaatcagaacacaaaaacatacatagacggtcta
aaacagatggtcagtgagaatttaaagcagctggcatgctcgcctagtgtagaaatgcag
gacataccaccagatctcctatcactggaaaacacagaggagccaaatcctgatatcacc
aacagtcaagcagacgttgataaaagaattgaagccaacaatgaatattatgatggtgat
aaggacaatgataaagaaaatgatggttttatagaggtatga
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