Ruditapes philippinarum (Manila clam): 132743691
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Entry
132743691 CDS
T09557
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132743691
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
132743691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
ARL2_Bind_BART
Motif
Other DBs
NCBI-GeneID:
132743691
NCBI-ProteinID:
XP_060588226
LinkDB
All DBs
Position
Unknown
AA seq
2030 aa
AA seq
DB search
MNGEVPNVPITTLAGITSLTDLLPELPLPTPLPNAINNKSLLHNSKLSEKSRKLLEDADD
ALVEQISEILRHSATDDIELKDDLEGAPVDGEMSELLRAILANDPEVFSGGSKERSRRSS
GRSPHSGNHSPYQSHSPRIGLPTGSGSSSLQKSPSLPHQQPGSSNYNGEHYDKRHKHSKL
SSAVMSSPAQATVAESAVRQTSSRNSGLMDIDDNSTDGGSSHISRQNSKEYDRKGKGRLN
RNRKKAGNLKRSEEKSRNEFWVEKMKASGNPVVCLEPLETKKDDIWNSKCKPVRVSLEPL
DERDPKNETLKSIASGGTVKTKGLKRHGEYENDRLRKRRRSGRTEDSEDSDNDAVEELMR
RKKKEKRQRRMNQTDLSIEELLDSPTFKKFSTALEYIFDSAEDINFGSLDPNDEEVECPP
ESLISRSVLSELTSETAKLKSMGVLNQIPANTLVKLLTILQWNIRDGTKLLPSLNQENED
EDEEGQKLWREIAMERVGRSIDAALTAIYIMTSSKMPKQVFIEDVIDRIVMFGKFQLQNT
IYPEFDPVYRINPKDKDGYHSSSKMKRSRASQVKHKSSISLYNKLTDLVGNLAELVEIQE
LTDTIILQMSTLGVAPFFVENVSELQLNAMKLVTTVFAHYDKHRQLVLEDIFSSLARLPS
SKRNLRSYRLNAGEHIQMVTALALQLIQCVVKLPQPKSDDDPVEEEQIEEAAKSKRDKHG
RNKRKSDPLDPDVIIVTSYETAIRTGYNFLSVFLKKCTVKGEEDYRSLFENFVHDLLSTV
NKPEWPASELLLSLLGRILVQQFSNKSIEMSLRTSALEYLGIVAARLRKDAVSSQLSQEI
IDDIVTKVNHESDKEDDEEVKRSTRSGRKSPEEEVQEPDETQSLQKAMLDYLSYHGASEP
AYLFARQFYIAQWFRDTTKEAAKKHQKADEDFDAEEEEKSTENLADTEARTKFLLSQVET
SYKPYSSYKPLPSKLDYDSGCLVARYLSSKRPFAQSFDIYLGQILKVLAENAVAIRTKAM
KCLTSVVEADPGVLARPDMERGVHGRFLDPSTSVREAAIELVGKFILIRPELIPQYYNML
SERILDTGISVRKRVIKIFRDIFNEKPDFNKIPDMCVKMIRRVNDEDGIKKLVNEVFQTM
WFTPLSSREKDSSKLIQRVVNITEVVAASKDTGFEFIEQLLDNLLKKDEHGNYNKSALTS
CRQIVDCLVENVLRLEETSVDGKCSNRLSACLSTLFLFGKIKPDLMLEHAQTLQPYLNIK
CSNQGDFYVLHYVARILELVIPLMDHPSENFLAQVEEDMIKLILNHGMMVLESCVSCLGA
VVNNVSHNYPLVKDCFQKFFGYLVKFQSYHQEHPTVPLQGNRKPTLLRSLFTVGLMCKHF
NFETTELQDDGDTSLKEKIFDVLIYYTEHPDEDVQSKALTGLGFLAVRHYEYMLGRTLKT
MYSEHLTNPDSPIKLKCQVLKNLSYYLVEEEVRMAKSDADWKKHAKEEDLKEMGDVQSGM
ASTIMQVYLKEVLEVFFSSKSQVRLEALNVIQLVLKQGLIHPVQCVPYLISMATDSEAPI
RVKAEQQLQEIEKKYPGFIHSKALQGIKMCFRLQRLIQGSEGNNFVVRGLHNPDDNSSSL
NAFLYNILRTNRSHRRAILTSLLNLLDDSARINLPEQMYIADNLAFFLYQTQDEPLFIIH
QIDIIVSVSGSNLLQSFREKLQFKDNRSRKMMLSNPHATENGVLNDKPTMYYDEDDDDKD
ILLSRLPKDITPLKEIIWIAQGCILLLYLKQHLKDMYGFTDGKIQNYSPTEAAKVYDKPL
QRKALVKFNPEQVIHVLRNKEKNEEKSYEEQADQLVDDYLAFKDLMLSVDPPDEDDSEDD
QTTKLSTTYTIKSKPDGGGGDAGTTNHIENGEDSKSNADVIMVDGEHGDADHVNLDKESP
TDPMKPKIPPMIISTSKLNTPVREKEKKKGSLVRTIRLPGASQLQASAHNFTSPVHSHSS
HHTSHHSSSSSSRSHHHKTPSSTHKKKKKKRKRYTSDSDDDNDSDYDPYG
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgaggtaccaaatgttcccatcaccaccttagcagggataacaagtctaaca
gacttgttacctgaactgcccctgccaactccattgccaaatgccataaacaataaaagt
cttcttcacaattccaaattgtcggagaagtcccggaaactattagaagatgcagatgat
gcgttggttgaacaaatatcagaaattctcagacacagtgctacagatgacattgaactc
aaggatgaccttgaaggggctcctgttgatggtgaaatgtcggagctccttagagccatt
ttagcaaatgacccagaagtgttttctgggggatcaaaggagagatcaaggagaagctct
ggcagaagtccacacagtggaaaccattcaccttaccagtcacactctccaaggattggt
cttccaactgggagtggatcttcaagtcttcagaaatcaccctctcttccccatcaacag
ccaggctcatcaaattacaatggtgaacattatgataagcgacacaaacatagcaagctg
tcatcggcagtcatgagttctcctgcccaggcaacagttgcagaatctgcagtgagacaa
acaagcagtagaaactctggattaatggatatagacgataatagtactgatgggggatct
tcacatatatcacgacagaatagtaaagaatatgatagaaagggaaaaggtaggcttaac
cgaaacagaaaaaaggccggcaatttaaagaggtcagaagagaagtcaagaaatgaattt
tgggtagagaaaatgaaggcatccggaaatcctgtggtgtgtctagagcccttggagaca
aagaaggatgatatttggaatagcaagtgtaagcctgttcgtgtttccctggaaccatta
gatgaaagggatcccaaaaatgagacgttaaagtccatcgcatcaggtggaacggtgaaa
acaaagggattaaaaaggcatggggagtatgagaatgatcgtttaaggaagagaagacgg
tctggtagaacagaggacagtgaagatagtgataatgatgctgtggaagaattgatgcgt
cgcaaaaagaaagagaagcgacaaaggcgtatgaatcaaactgacctcagcatagaagag
cttctggacagtccaactttcaagaagttcagcacggctttggagtatatatttgacagt
gctgaagatatcaattttggaagtttagatccaaatgatgaagaagttgaatgtcctccc
gagtcgttgataagtcgctcagttttgtctgaactgaccagtgaaacagctaagttgaag
tccatgggtgtgcttaaccaaattccagcaaatacacttgtaaaactgctgaccatatta
cagtggaatatcagggatggcacgaaactgttaccaagtcttaaccaggaaaatgaggat
gaggatgaagaaggtcagaaattgtggagagaaattgccatggagagagttggtagatcc
attgatgcagcacttacagccatatatatcatgacatcatccaaaatgccaaagcaagtg
ttcatagaagatgtcatagatagaatagtcatgtttggcaagtttcagctacagaatacc
atctaccctgaatttgatcctgtatatagaataaatcccaaagataaagatggatatcat
agtagttcaaagatgaagcgatctcgtgcaagccaagtgaaacacaaatcttcaatatca
ttatacaataaactgacagacctggttgggaacctggcagaacttgtagaaatccaggag
cttacagacaccattatattacagatgtcaactttgggtgttgctcctttctttgttgaa
aatgttagtgaattgcagttgaatgcaatgaaacttgttacaactgtgtttgctcattat
gacaagcacaggcaattagtgctagaagatatattctcaagtttagcaaggctgccttcc
agtaaaagaaatctcagaagttacaggttgaatgctggtgagcatatacagatggtcaca
gctttagcattacagttgatccagtgtgttgtcaagttacctcagccaaaatctgatgat
gatccagttgaagaagaacaaattgaagaggctgcaaaatcaaaaagagataaacatgga
aggaacaagagaaaatcagatccattggatccagatgtgataattgtaacatcatatgag
actgcaattagaacaggatataacttcctctctgtatttctcaaaaaatgtacagtaaag
ggagaggaagattatcggtcgttgtttgaaaactttgtacatgatctcttatcaacagtg
aataaaccagaatggcctgcttcagaattacttcttagtttgttgggaagaatactggtg
caacagttcagcaataaatccatagagatgtcattgaggacatcagctttagagtattta
ggaattgtggcagcaagattgcgcaaggatgctgtgtctagtcagttaagtcaagaaatc
atcgacgatattgttacaaaggttaaccacgaaagtgataaggaagatgatgaagaagta
aaaagatcaacgagaagtggcaggaaaagtcccgaggaagaagtacaagaaccagatgaa
acccaaagtttacaaaaagctatgcttgactacctctcatatcacggtgccagtgaaccg
gcctatttgtttgcacgccagttttacattgctcaatggttccgagacacaaccaaagaa
gcagcaaagaaacatcagaaagctgatgaggattttgatgcggaggaagaagaaaaatca
actgagaacttggctgacactgaagctagaacgaaatttctgctatcacaagttgaaacc
agctacaaaccatactcatcttacaaaccacttccaagtaaattggactatgacagtggt
tgtttggtagcaagatacctgtcttcaaaacggccgtttgcacaaagttttgatatttat
cttggccagatcttaaaagtgctagctgagaatgctgtagccattagaacaaaagctatg
aagtgtctaacatcagttgttgaggcggatccaggagtgttagctaggcccgatatggaa
agaggtgttcatggcagatttcttgatccatccacgtcagtaagagaggcagctatagaa
ctagtgggaaagttcattctcatccgtccagaactcattccacagtactataacatgctc
tcagaaagaatactggatacaggcataagtgtgagaaaacgtgtgatcaaaatcttcaga
gacattttcaacgaaaagccagactttaataagattccagatatgtgtgttaaaatgata
cgtagagtgaacgatgaagatggaattaaaaaactagtgaacgaagtgtttcaaactatg
tggtttactccattgagttctagagaaaaagactcgtcaaaacttattcaaagagttgtt
aatatcactgaggttgttgcggctagcaaagatacgggttttgaattcattgaacaatta
ttggacaatttgttaaagaaagatgaacatggaaactacaacaagtcagcattaacgtcg
tgtaggcaaattgtagactgtttagttgaaaatgtgctgcggttagaagaaacaagtgtt
gatggtaaatgcagcaatcgtttgtctgcctgtctgtcaacattgtttttgtttggcaaa
ataaaaccagatcttatgttagaacatgcacaaactctccagccatatcttaatatcaaa
tgcagtaatcagggtgatttctatgtactacattatgtggcaaggatattagagcttgtg
ataccattgatggatcatccaagtgaaaacttccttgctcaggtagaggaggacatgatc
aaattgatattgaatcatggaatgatggtgctagaaagttgtgttagctgtttaggtgct
gttgtaaataatgtcagtcataattatcctcttgttaaagattgcttccagaagttcttt
ggttatctagtgaagtttcagtcgtatcatcaagaacaccccacagtccctctccaaggc
aacagaaagccaacacttctcaggtcattgttcacagttggtctcatgtgtaaacatttt
aactttgaaaccacagagttgcaagatgatggggatacatcattaaaagagaagatattt
gatgtgttgatatactacactgaacaccctgatgaagatgtgcaatcaaaagctctaact
ggtctaggttttcttgctgttagacattatgaatatatgctgggaaggacgcttaaaacc
atgtacagtgaacacttaaccaatccagattctcctatcaaactcaagtgccaagttttg
aaaaacctttcctattatcttgtagaagaagaagtaagaatggcaaagtcagacgctgat
tggaagaaacatgcaaaggaagaggatcttaaagaaatgggggatgtgcaatcaggaatg
gccagtaccattatgcaagtgtacttgaaagaggtgctggaagtgtttttctcaagcaag
tcgcaggttcgacttgaagcattaaatgtgatacagttggttctcaaacagggcctcatt
catcctgtacagtgtgtaccatatctcatcagcatggcaacagactctgaagctccaatc
agagtcaaggcagaacaacagttgcaggaaatagagaagaaatatccagggtttatccat
agtaaagccctgcaagggattaaaatgtgcttccgtctacagcggcttattcaaggttct
gagggcaacaattttgtagtgagaggtcttcacaaccctgacgataacagttcaagtctt
aatgcattcctttataacattttacgaaccaataggtcacaccgaagagccattctcacc
tcattacttaatcttctagatgattctgcaagaatcaacctaccagaacaaatgtacatt
gcagataaccttgccttctttttataccaaactcaggacgagccactgtttataattcac
cagattgacattatagtgtcagtgtctggatctaatctgttacagtctttcagagagaag
ctgcagttcaaagacaacagatccagaaaaatgatgctgtccaatccacatgctactgag
aatggtgtacttaatgacaaaccaaccatgtactatgatgaagatgatgatgacaaagat
atcttacttagccgcttacccaaagacataacccctctcaaagaaatcatctggatagct
caaggttgcatcctcttgttatatctaaagcagcatctcaaagatatgtatggatttact
gatggtaaaatccagaattattctcccactgaggcagccaaagtgtacgacaaaccatta
caacgtaaagctctggtgaagttcaatccagaacaagtgatccatgttttacgtaacaaa
gaaaagaacgaggagaaatcgtacgaggaacaggccgatcagcttgttgatgattaccta
gctttcaaagatctcatgttaagtgtagacccaccagatgaagacgacagtgaagatgat
caaactactaaactgtctaccacatacactataaaatcaaagcccgatggtggtggaggc
gatgctgggaccacaaatcacatagaaaatggtgaagactcaaagagcaacgcagatgtt
ataatggttgatggtgaacatggagacgctgaccatgtcaacttagataaagaatctcct
acggatcctatgaaaccaaaaattcctccaatgataatatcaacttcaaaactgaacact
cctgtacgcgagaaagagaaaaagaaaggatcattagtgcggactataagattaccaggg
gcttcccaactacaagcctcagcacataactttacatcacctgtacatagtcattcatcc
catcacacttctcatcattcatcatcatcgtcgtcaagatctcatcaccataagacacct
tcatcgacacataaaaagaagaagaagaaacggaaacgatacacatcggactctgacgat
gataacgatagtgattatgatccgtatggttga
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integrated database retrieval system
