Ruditapes philippinarum (Manila clam): 132743850
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Entry
132743850 CDS
T09557
Name
(RefSeq) glycine receptor subunit alpha-2-like isoform X1
KO
K05195
glycine receptor alpha-3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132743850
04082 Neuroactive ligand signaling
132743850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132743850
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Glycine
132743850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Bac_export_2
Motif
Other DBs
NCBI-GeneID:
132743850
NCBI-ProteinID:
XP_060588406
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MYISIYTSIIVFSGILISSTRCEALSRREITSYLLNASRYDANIVPDFDEEFPTNVTIQI
TIHDMHSISEAKMEYSIDVYLRMWWRDPRLDFTANTTSDTKLELDSKNTDNVWQPDIFFP
NEKRAYVHTVTSTNKLMHIFRNGTVVYSVRLSLSLGCTMLLQYYPFDSQQCSIDIQSFGY
TNDNIKLHWHERQGIITDHLEMPQFTLLEDEIVTNDYEYRYSATGTFSALKANLVMTRKV
GFYFLQVFVPSILLVVLSWVSFWVDPNAVPARVSLGVTCVLTMTTQSSGIRQSLPPVSYV
KAIDIWMFVCLLFVFAALLEFAYVNVLQRAKSKKTTRSEVSNEENDMDGKQKRQDEPKPK
TNAWIAFLTKPFNKSGTDGQTAAKRADMISRVLFPLSFFLFLVIFFCVCGFAPHPKPDQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtatataagtatatatacttcaatcatcgtgttttctggaattcttatctcatcaacc
agatgcgaggctttgtcaagacgagagatcacttcatatttgttaaacgcctctagatat
gatgctaatattgttcctgactttgatgaagaatttccaacaaatgttaccatacaaatc
actattcacgatatgcattctatcagtgaagcaaaaatggaatattctatagacgtgtat
ctacgtatgtggtggcgagatccgcgtctagattttactgcaaacacgacaagtgatact
aaactcgaacttgactcaaagaataccgacaatgtatggcaaccggatatcttcttccca
aatgaaaagagagcatatgtacataccgtgacgtcaacaaacaaattgatgcatatcttc
cggaatggaaccgtggtatacagcgtcagattgtctttgtccctgggatgtacaatgttg
ttacagtactacccatttgatagccagcaatgctctattgatatacagagctttggctac
acgaatgacaacataaagttacactggcacgagagacagggtattatcacagatcatctt
gagatgccacagtttacgttactagaagatgaaatagttaccaatgactatgaatatcgt
tactcggcaaccggaacgttctcggcgttaaaagcaaatcttgtgatgacgagaaaagtc
ggtttctattttctacaagtgtttgtaccaagtatcttacttgttgttttgtcttgggtg
tcgttctgggttgatccaaatgctgtacctgctcgagtttctctaggagtaacctgcgtg
cttaccatgacaacacaaagttccggtatacgacagtcacttccgccagtgtcttacgtc
aaggcaatagatatttggatgttcgtgtgtctactctttgtgtttgctgcgttacttgaa
tttgcgtatgtgaatgttctacagcgggcaaagtcaaagaaaacaacaagatctgaagtc
agtaatgaagagaatgatatggatggcaaacaaaaaagacaggacgagcctaaaccgaaa
acgaatgcatggatagcattcttgacgaaaccatttaacaagagtgggactgacggacaa
acggcggcaaaaagagcagatatgatatcacgggtgttatttcccctgtctttcttttta
ttcttggttattttcttttgtgtttgtggattcgccccacacccaaagccagaccaataa
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