Ruditapes philippinarum (Manila clam): 132743997
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Entry
132743997 CDS
T09557
Name
(RefSeq) acetylcholine receptor subunit alpha-like
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
132743997
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132743997
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132743997
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132743997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5698
Motif
Other DBs
NCBI-GeneID:
132743997
NCBI-ProteinID:
XP_060588579
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MDYKLLIVTFLLFQLEYIHCSNITQVEGLYTNLFKNYNKKLFPLINHNNSMEINVTIGII
SINNFDELSGEIEITMYFNFQWIDENLIWTPSQYGGKSVLLVASEDIWRPQLYLLQSYDT
LQEITNVSLMARLFSNGLVMWNIGSVLKIVCSVDVTYFPFDTQTCLLMVSGWAYTNDEVL
LIVNSAKVNEDSFSNNSQWILQSATSQNNYDIISSFPPTIFVILKLQRRSDFFVVYIIFP
MVFLGLINNLVFVMPVNSGERTSVAITTFLSFIVFMQMINSIVPESSEPMAYIYYYILFL
LVYSSLILFLCICSLCIYEKDTPVPQSIEKMIYCIRCWYFKRNKDKVTPERRTSILSEQV
DVKSTNVKLSFSQYVDETPLVTWILVGKTFDSCCYILLLMTYLAMTIHTFVKLYLNYSF
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggattacaagctattaattgtgacttttttattatttcaacttgaatacattcactgc
tcaaatataacacaggtcgaaggtttatacacaaacttgttcaagaactataacaagaaa
ctttttccattgataaatcacaacaattcaatggaaataaatgtcacgataggaatcata
agtataaataatttcgatgagctgtctggcgaaatagaaattacaatgtatttcaatttt
caatggattgacgaaaacttgatatggacaccttctcaatatggtggcaaatcggtgttg
ttagtggcttcagaagacatttggcgaccacaactttatcttctacaatcatatgacaca
ctccaggagataacgaatgtatcgttgatggcacggttattctcgaatggcctcgtcatg
tggaatattggaagtgttttgaaaattgtttgttccgttgacgtgacgtattttcctttt
gatacccagacatgtttattaatggtttcaggatgggcttacacaaacgacgaagtgtta
cttatcgtcaatagtgcgaaagtaaatgaagattctttttccaacaatagtcaatggata
cttcagtcggcaacgtcacagaacaattatgatataatatcatcatttcccccgacgatt
tttgtgatactgaaactacaaagacgaagtgatttttttgtagtctacataatatttcca
atggttttccttggccttataaataatcttgtgtttgttatgcctgtaaattctggggag
aggacatcagttgctattacaacatttttgtcatttattgtttttatgcaaatgataaat
tcgattgttccggagagttcagaacctatggcttatatatattattatattctttttcta
ttggtttacagctctctcattttatttttgtgtatatgctcgttatgtatctatgaaaag
gacacaccagttcctcagtccatagaaaagatgatttattgtattcgatgttggtatttc
aagagaaacaaagacaaagtaacgcctgagaggagaacctccattttgtctgagcaagtt
gacgttaaaagcactaacgtaaagttatcgttcagtcaatatgttgatgaaactccttta
gtgacttggatattggttggtaagacatttgattcctgctgctatattcttctgttaatg
acatatttggcgatgaccattcataccttcgtaaaattgtatttaaactacagtttctga
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