Ruditapes philippinarum (Manila clam): 132744351
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Entry
132744351 CDS
T09557
Name
(RefSeq) tumor susceptibility gene 101 protein-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03250
Viral life cycle - HIV-1
rphi03272
Virion - Hepatitis viruses
rphi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132744351
03272 Virion - Hepatitis viruses
132744351
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132744351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132744351
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132744351
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
132744351
Exosome [BR:
rphi04147
]
Exosomal proteins
Proteins found in most exosomes
132744351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
Spc24
Motif
Other DBs
NCBI-GeneID:
132744351
NCBI-ProteinID:
XP_060589021
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MSNYEQFLKSSLNKYKTPDVTKRDVLSVFTTFSDLRPKLDDFVFNDGTRKSLLQLDGTIP
VNYKGAVYNIPICIWIMDTHPYNPPMVFVKPTPTMQIKSGRNVDMNGKIDLPYLREWKYP
NSDLIGMIQILTIVFGEEPPVYSRQQQQQAPPIRYPNQTPYPPAGNSSFPMPMPGMGGTS
NTPYPSNTPYPSSNVGYPQTSSYPGQYAGYQPPTTGFQGYPNYSGAPASSGYPGANNPPA
YSQSQATNYQSTSSTASNYSGGGGTNTVTEEHLKASLLSAVEDKIKWRLKETFAQAQAEM
DVLYKTQADLLKGKDKLETMIKDLEKEKSEIGANIILLKQKDGEVKETLSRLENQEQINI
DDAVVTTAPLYRQLLKAFAEEQAIEDAIYYLSEALRKDVIDLEVFLKRVRELSRKQFMLR
ALIQKCREKAGLPPLA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctaactacgagcagtttttaaaatcgtcgctaaacaagtacaaaaccccagatgtt
acaaagcgtgatgttcttagtgtcttcaccacattcagtgacttgagaccaaagttagat
gactttgtgtttaatgatggtacaaggaaatccttattacagttagatggaactatacca
gttaattataaaggggcagtgtataatataccaatatgtatatggattatggacactcat
ccatacaacccccctatggtgtttgtaaaaccaacacccacaatgcagatcaagtcgggc
aggaacgtagatatgaacggaaaaattgatctgccttatcttagagaatggaaatatcca
aattcagacctgattggaatgatacagatattaacaatagtatttggcgaggaaccccct
gtgtactcgagacaacaacaacaacaagcgccccctatccgctacccaaaccaaacacca
tacccaccagctggaaacagttcattcccaatgccaatgcctggaatgggtggaacaagt
aacacaccctatccatcaaataccccgtacccatcctcaaatgttggctacccacaaact
agtagctaccctggacaatatgcaggatatcaaccaccaactactggtttccaaggttac
cctaactattcaggagcaccagcttcatctgggtacccaggagcaaacaatccccctgca
tatagtcaatcacaagctacaaattaccaatctacatcttcaacagcatcaaattacagt
ggaggaggtggtactaatacagtgacagaggaacatttaaaggcatcgctgttgtcagca
gttgaggacaaaataaaatggaggctgaaggagacatttgctcaagcacaggctgaaatg
gatgttttgtataaaacacaggcagacttgctgaagggtaaagataaactggaaacaatg
atcaaagatttggaaaaagaaaagtcggagataggagcaaatatcattttattgaaacag
aaggacggtgaagttaaagagacattatctcgcctggagaaccaagagcagataaatatt
gatgatgctgttgttactactgcaccactttatagacaattattgaaagcatttgcagaa
gagcaagccatagaagatgctatctactatctaagtgaagcgttacggaaagatgtgata
gatctagaagtctttttgaagagagttcgagagttgtcaaggaaacagttcatgttacga
gcgttgatacaaaaatgtcgggagaaggctggattacctcccttggcatga
DBGET
integrated database retrieval system
