Ruditapes philippinarum (Manila clam): 132744455
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Entry
132744455 CDS
T09557
Name
(RefSeq) deleted in malignant brain tumors 1 protein-like isoform X1
KO
K06545
CD163 antigen
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rphi04090
]
132744455
CD molecules [BR:
rphi04090
]
Proteins
132744455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRCR
SRCR_2
Sushi
Hepsin-SRCR
MmgE_PrpD_N
Motif
Other DBs
NCBI-GeneID:
132744455
NCBI-ProteinID:
XP_060589154
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MDGRFRMQLRLHENIKMKKANFSTIKLQFWVILLHALTRSIAGGEKLNVNGIRLVNGTQP
YSGRVEISINGVWGTVCDDSFDIYDAQVMCKMMNLTATAFKSGAFYGPGIGPIFAQRFVC
YSFLSHLKDCEFVPNAGCTHDRDISIFCSECGKLEIRNGEIQSISADGRNIVIACIDGYS
SNITISTCENGSWSVPTINCTSESPNIRLVNGIGLYDGRVEIFKSGTWGTICSTSFIFYE
AKAICNILFGQSSYRDYYRNSITYGSGTGSIHIDNLDCDGYETNIDECKYSREVSCTDHD
RDVAVACNKWPMNLVTNTRLVNGTGPYDGRIELFVNGQWGTIDARFVDMYDARTLCKTHN
ASLAIYFESAIYGQGTGPILSRELNCDGEQSHIRKCSGKSPYGSSSHTYDLSIACTSCGV
PTIYNGEPISFNGNELTIACHIGSLPKQVTMTCQQDKSWFQKQRCTPYLEYPLTIEEVLL
QDGYIPTEGRVELKVNGTWGTICGTGFDSADAQVVCYMFGLQYKKFSVKAKHSSKFGSGP
IYISNMTCNGTESHINECRYEISNNCTHYDDVAVECTGYHLNITDVRLAGTNGPYHGRVE
VKVNKTWGTVCHNSFTSTEALLICRMLGLPTYENYHYHPLYGHGSGPIYLDKLDCGYYAT
HFNQCRYSINNYYNCDHSDDVSVVCYGPTLNITDARLVNGTSIHDGRAEIKVNDTWGTIC
DNNFDIQAADLFCRILGLRAAQYFTGAIYGEGSGPVFIDQLFCNSYDYTLSDCNYLFLNE
CSHARDISVVCNECGQPDIFFWGVDFFTYNGTTLFADCSYYKTYVGKLELTCNNKTQEWV
TEGECQEYNFPLDLTDIRLVNGPNSTAGRVEIKSLDTWGTVCGNAFGIQEANVICRMLGY
PPAMGFYGKSHFGAGKGPIFIDDLICHEDAVHLNNCTYETYDNCNHDDDIAVVCTDCGNP
TPNNGFTNSTKTNYGAAVHVSCDKDHILDGKSDIICQINGEWTNKPRCKLIDCGDPNTCQ
WES
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggatggacgttttcggatgcaactaagactacatgaaaatataaagatgaaaaaggcc
aacttctcaacgataaaattgcagttttgggttatacttttacacgctttaactagaagc
attgcaggtggtgagaaattaaatgtaaatggtatacggctagtcaatgggacgcaacca
tatagtgggagagtagaaatcagcatcaatggtgtttggggaaccgtttgtgatgattcg
tttgatatttatgacgcacaagtcatgtgcaaaatgatgaatcttacagcaacagcattt
aaatcaggtgcattttatggaccaggcataggaccgatatttgctcaaaggtttgtgtgt
tacagttttctatcacacctaaaagattgtgagttcgttcctaatgccggatgtacacat
gatagggatatcagcattttttgcagtgaatgtggtaaattagaaatacgtaatggagaa
atacagtccatatcagctgatggaagaaacatcgtaatagcctgtatagatgggtacagc
tcaaacattacaataagtacttgtgaaaatggaagttggtctgttccgacaataaattgc
acatcagagtcaccaaatatccgactggtaaacggaattggattgtatgatggcagagtc
gagatctttaaaagtggaacttggggaactatttgcagcacatcatttatcttttatgaa
gctaaagcgatttgcaatatcctttttggccaaagttcatacagagattactacagaaac
tcaatcacttacggatcgggcacaggatcaatacatatagacaacttagattgtgatggc
tatgaaactaatatagatgaatgcaaatacagccgagaagtgtcatgtactgatcacgac
agagatgttgccgtcgcttgtaacaaatggccaatgaacttggtaacaaataccagactt
gttaatggcacaggaccttatgatggtcgtatagagttgtttgttaatggtcaatgggga
acaattgatgcgagatttgttgatatgtatgatgctcgcacactatgtaagacgcacaat
gcaagtttggcaatatatttcgaatctgcaatatatggacaaggaacaggacctatatta
tcaagagaacttaactgtgatggtgaacagagtcacatacgcaaatgttctggtaaatca
ccatatggatcttcttcacatacgtacgatttgtctatagcttgtacatcatgtggtgta
cctacaatttataacggagaacctatttcattcaacggaaatgaattaactatagcatgt
catattggatctctgccaaaacaagtcacgatgacatgtcaacaagataaaagctggttt
cagaaacaaagatgcactccatatctggaatacccattaacaatagaagaggttttactg
caagacggatatattcctactgaaggacgtgttgaactgaaagtaaacgggacatgggga
acaatttgtggtacaggatttgattctgctgatgcacaagttgtatgttatatgtttggt
ttacaatataaaaagttttccgtcaaggcaaagcattccagtaaatttggaagcggtcca
atttacatcagcaatatgacatgtaatggcacagagtcacatataaacgaatgcagatac
gaaatttcaaataattgtacacattatgatgacgttgcagtagagtgcacaggatatcac
ttgaacatcacggacgtgagattagccggaacaaatggaccgtatcacggtagagtagag
gtaaaggtcaacaaaacatggggaactgtgtgtcacaatagttttacttctactgaagca
ttacttatttgtcgtatgcttggacttcctacgtatgaaaattaccattatcatccatta
tatgggcatgggagtggaccaatttacttagacaaattagactgtggctattatgccact
catttcaaccaatgtcgctattccataaataactactataactgtgaccatagcgatgat
gtgtcagttgtgtgttacggaccgacattaaatataaccgatgctaggcttgtgaatggt
acaagtattcacgacgggcgtgctgaaataaaagtaaacgatacatggggcactatttgt
gataataactttgacattcaagctgcagatttattctgtaggatacttggtctgagggca
gctcagtatttcactggagccatatatggagaaggcagtggtcctgtgtttattgatcaa
cttttctgcaatagctacgattatactctgagcgactgtaactatttgtttctcaatgaa
tgtagtcatgctagagatatctctgttgtttgtaacgaatgtggacaacctgatatattt
ttctggggcgttgattttttcacctacaatggcacgacattgtttgcggattgctcatac
tataagacttacgttgggaaattagaactgacgtgtaataataaaacacaagagtgggta
acagaaggggagtgtcaagagtataattttccgctagatctcactgacatacggcttgtt
aacggaccaaattcaacagctggtagggtcgagatcaagtctttggatacgtggggaaca
gtatgcggtaatgctttcggaatacaagaagctaatgttatatgtcgaatgcttggatac
ccgccagcaatgggattttatggtaaatcacattttggagcaggtaaagggccaatattt
attgacgatctaatttgtcatgaagacgcggtccatttaaacaattgcacgtacgaaaca
tatgataattgtaaccatgatgacgatatagctgttgtatgtacagattgcggtaaccca
acaccaaacaatggctttacaaactcgacaaagacaaattatggtgctgcagtccatgtt
tcttgtgataaagatcatatactggatggtaaaagtgatatcatatgtcagataaatggg
gagtggaccaataaaccgagatgtaaactaattgattgtggtgatccaaacacctgccaa
tgggaaagttaa
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