| Entry |
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| Name |
(RefSeq) ribonucleases P/MRP protein subunit POP1-like
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| KO |
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| Organism |
rphi Ruditapes philippinarum (Manila clam)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rphi00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132744520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:rphi03009]
132744520
03016 Transfer RNA biogenesis [BR:rphi03016]
132744520
03029 Mitochondrial biogenesis [BR:rphi03029]
132744520
Enzymes [BR:rphi01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
132744520
Ribosome biogenesis [BR:rphi03009]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
132744520
Transfer RNA biogenesis [BR:rphi03016]
Eukaryotic type
5'processing factors
Ribonucrease P
132744520
Mitochondrial biogenesis [BR:rphi03029]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
132744520
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
904 aa
MSLAYCAYLQNGCAHVITCSVWPIKMNPPQFGGKRKTGPDYQRPYKKSKVEDVLSAAPRE
VDIVRYAESHAKEIQVLSSKVDIVGGGKNIAQKIPPHMRRRAMSHNVKRLPKSIRAQAAH
LTGTKVKKPSRYHRRRPKNLLAEYTRRQRKHIWLETHIWHAKRFHMVDKWGYRLPWKPTM
KSERACYRATSKHCLLQDLSFMSCIEIEGPQDEIIQGLTHVTTPDIGQTFAAVSCLAGTR
EGNTIMYQCDKYPWQAIGPVSFMWNSCQPISDECQDKGTNQRQLWIWCHPSMFDQIWKEI
SSCLNLKESKLSKKSDSEKLNTDTKKDNEEKDEPFICDKYKSNVLAEDGENQVKMKSLTG
SLLRFRLTGPQSTAVLVDTLQQANIVPVNVSAKDNPSWWNSYYGNPKHSIGHVTQREFME
SMEACQSPAELPPHCIIAMTTRDPRLTRPVQKTKVVASEDKISEDLSSFKEKLTIDISTS
PLWIENIRNEVSNTKLPDFRIHELKSQNLVPGFPLELGDEESRIPVIVIQRPGVTSLPNT
KGHAPNLGRGSGFDLLVPKGWGMAFWIALVFRGTRCAGLREQECNAYEEKSLYFPNDFPD
TLAGDQYQQDLEKEKVEKYNKIPASKKPNFTKYGIVSPFSCPWDLLVKEWKKGKDGNGGS
DHSKTNDDTGNVNNKDVNKIDMKGAFDQTTSQSDKECRNIEKFYVLRNVKLLRKLQNICH
VSKNRSSQKGKLDVKNEVLNILEKDHGDSLVPVRLDMIQKGSPVQFATICVPNKEDIELL
NKNNNYGGPMEPLHVDPVLVEKKDLKKQLKQKGLKQKVKVDRTLKLTSEKDEMTVRTGCR
DVIGYLNSGGYSLGTGNGGGVGFVSTLALITLLRNSEGSENEPVVLVRGNTSLQYRVARL
SIIA |
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| NT seq |
2715 nt +upstreamnt +downstreamnt
atgtcccttgcttattgtgcttacttacaaaatggctgcgcccatgtaatcacatgcagt
gtgtggccaattaaaatgaatcctcctcaatttggtggtaagagaaagacaggtcctgat
tatcagagaccttataagaagagtaaagtagaagatgttttgtcagctgctccaagagag
gtagatattgtacgctatgctgaaagtcatgcgaaagagatacaggtgctcagtagtaag
gtggatattgtcggtggaggtaaaaacatcgcccagaaaattcctcctcacatgagaaga
cgtgccatgagtcataatgtaaaaagattgcctaaaagtatcagagcacaggcagcccat
ttgactggtacaaaagtgaagaaacctagcagatatcatcgtaggagaccaaagaattta
ctagctgaatatacaagacgacaaagaaaacatatctggcttgaaacccatatctggcat
gccaaaaggttccatatggttgataaatggggatataggttgccatggaaacctacaatg
aaaagtgagagagcttgctacagggcaaccagtaaacattgtttacttcaggacctgtca
ttcatgagctgtattgaaatagagggaccacaagatgagataattcaggggttgacacat
gtaacaactcctgatataggtcagacatttgcagctgtttcatgtttagctggtaccaga
gagggaaacacaatcatgtatcaatgtgacaagtatccgtggcaagccattggtccagtc
tcattcatgtggaactcatgtcagccaatcagtgatgaatgtcaggacaaaggaaccaat
caaaggcaactttggatttggtgccatccgagcatgtttgatcagatatggaaagaaata
tcaagttgtctgaaccttaaggaatctaaactttccaaaaagtcagacagtgaaaagtta
aacactgacactaaaaaagataatgaagaaaaagacgagcctttcatttgtgacaagtat
aaatcaaatgttttagcagaagatggagaaaaccaagtaaaaatgaaatctttaacagga
tctttgttgaggtttcgtttgactggtccacaatcaactgctgttcttgttgataccctc
caacaggcaaatatagtaccagtcaatgtatcagcaaaagataatccatcttggtggaat
agttactatggaaacccaaaacattccattggtcatgtgacccaacgagaattcatggaa
agtatggaagcttgtcaatccccagcagagttacctccccattgtattattgctatgaca
actagggatcctcgactgaccagacctgtacagaaaacaaaagtggtggcaagtgaagac
aagataagtgaggacttgtcttcattcaaagaaaagttaactatagatatctccacctcc
ccactatggattgagaatatcaggaatgaggtctccaacacaaaactccctgacttcagg
atacatgaactcaaatcacagaatcttgttccaggttttcctctagaactaggtgatgaa
gaatcaaggattccagtaattgttatccagaggccaggagttacttcccttcccaacact
aaaggacacgcacctaacctagggagaggaagtggttttgatctccttgtgccaaaggga
tggggtatggcattttggattgctctagtattcagagggacaagatgtgctgggctgagg
gagcaggaatgtaatgcttatgaggagaagtccttgtatttcccaaatgattttcctgat
actttggcaggtgatcagtatcagcaagatcttgaaaaggaaaaagttgagaaatacaac
aaaattccagcatcaaagaaaccaaatttcaccaagtatggaattgtttcccctttcagc
tgtccctgggatttattagtcaaagaatggaagaaaggaaaagatggtaatggaggaagt
gatcattcaaagacaaatgatgatactgggaacgtaaataacaaggatgtaaataagatt
gatatgaaaggtgcctttgaccaaacaacttcgcagtcagataaagaatgcaggaacatt
gaaaagttttatgtcttaaggaatgttaaactgctccggaagctacaaaatatttgccat
gtgtcaaaaaacagatcttctcagaaagggaagcttgatgtgaaaaatgaagtgttgaat
attttagagaaggatcatggagattccttagttcctgttagactagatatgatacagaaa
gggtctcctgttcagtttgccaccatttgtgttccaaataaagaagatattgaactgctt
aataagaataataactatggcggacctatggagcctctacatgtagatccagttcttgtg
gagaaaaaggatttgaaaaaacagttgaaacagaaaggattgaaacagaaagtgaaagta
gacagaacattgaaactgactagtgagaaagatgagatgactgtcaggacaggttgtaga
gatgtaatagggtacctgaactctggaggttattctctaggaacagggaatggaggtggg
gtagggtttgtgtcaactctggcactgataactttacttaggaacagtgagggatcagaa
aatgaaccagttgttctagttagaggaaatacatcattacaatatcgggttgctagactc
tctatcatagcatag |
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