Ruditapes philippinarum (Manila clam): 132744986
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Entry
132744986 CDS
T09557
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132744986
04121 Ubiquitin system [BR:
rphi04121
]
132744986
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
132744986
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132744986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
132744986
NCBI-ProteinID:
XP_060589799
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MTSHIKSATMSESRRYRNPPAKFTSNVWKYFGISIENEKKAVCKTCQGEMTYTGGTTNLS
NHMKRHHGIDPISKGGVKLQTSATEASTSTSCVTASISPSNPFHMAQRVKLAPSKVHRIT
VGIARYLIDDMRPFSTVESSAFRSMIHECEPRYKFPCIQTFSEDVIPRLYDSVASRIKGK
LLSAEAIAWTSDSWTSRATQSYVTITAHFIDSEMELCSRVLQTRQLPESHTGEHVGNVLR
QAQLEWGCQVCALTTDNAANMKIAAHTAGISIHIGCFAHTLNLASSRALDIKEVHHILAK
IRSVVSFMHRSTTAAALLKKKQKMLQLPENKLIIDVKTRWNSSYLMVERFLQQQLAILAC
LSDESIKKQHEAKSLQASSVLGQDEVRCLEIFLQLMEPMYQATLALSADQHPTVGLMYPL
LLKPKKLYTHMEGDTAFQQKIKKAILQDLEKRYINDVLLEYLEEATALDPWVKYKID
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacacatcaagtctgcaacaatgtcggagtcgcgacgatacagaaatccgcca
gctaaatttacctctaatgtgtggaaatatttcggtatctcaatagagaatgaaaaaaag
gctgtttgtaaaacatgccaaggtgaaatgacatataccggcggaacaacaaatctgtct
aatcacatgaaaaggcaccacggaatcgaccctatttcgaaaggaggtgtcaaattacaa
acgtcagcaacagaggcatctacaagcacaagctgtgtaactgctagcatatctccaagc
aatccctttcacatggcacaaagagtgaagttggctccatccaaagttcacagaataact
gtaggtattgcccgatatcttatagatgatatgcgcccattcagcaccgtagagagttca
gctttcagaagcatgatacacgagtgtgagcctcgctacaaattcccatgcatacaaaca
tttagtgaagacgtaattccaagactgtatgattctgtagcctcacgtattaaaggcaaa
ttattgagtgcagaagctatagcctggacctcagacagctggacaagtcgagccacccaa
tcatatgtgactatcacagcccacttcattgactctgaaatggaactctgttctcgtgtt
cttcagacaaggcagctaccagaatcccatactggagaacatgttggaaacgtgcttcgc
caagcacagcttgaatggggttgtcaggtatgtgcccttactacagacaatgctgcaaac
atgaaaattgctgcacatacagctggaatatccatccatattggatgctttgcccatacc
ttaaatttagcatcttcccgcgcacttgatattaaagaggttcatcatattttggctaag
atccggtcagttgtttcctttatgcatcggagtaccactgccgctgctctgcttaaaaag
aagcaaaaaatgctacaactacctgagaacaaactcatcatcgatgtcaaaaccagatgg
aattcgagttatctcatggtggagcgcttccttcagcagcaacttgccattttagcctgt
ctctcagatgaaagtattaagaagcaacatgaagccaaatccctacaggctagtagtgta
cttgggcaagatgaggttcgatgcttggagatattcttacagttaatggagcctatgtat
caagctaccctggcgctatctgctgaccagcaccctacggtagggcttatgtatccattg
ctcctgaaacctaagaagttgtatacccatatggagggagatactgcttttcagcagaaa
atcaagaaggctatacttcaagacttagagaaaaggtacataaatgatgttctgttagag
taccttgaggaagcaacagcattggatccctgggtaaagtacaaaatagattaa
DBGET
integrated database retrieval system
