Ruditapes philippinarum (Manila clam): 132745243
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Entry
132745243 CDS
T09557
Name
(RefSeq) contactin-1-like isoform X1
Organism
rphi
Ruditapes philippinarum (Manila clam)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_4
V-set_CD47
Lectin_C
Receptor_2B4
UL45
PS-DH
Motif
Other DBs
NCBI-GeneID:
132745243
NCBI-ProteinID:
XP_060590083
LinkDB
All DBs
Position
Unknown
AA seq
1328 aa
AA seq
DB search
MLIRGDHCEKTKSAILKKIQVSYRYVKMKAVLLILISIGSNLAQNFNNLFVCPDDWIPNG
DRCYQFSFQPRNYDDAAHICQKNGAILLSIDDIAENTFVLAHLRKVDNQRLEWYTSGERD
SSTVIARYVWTATNQEISLTSDIWIDRNEPINSDITRDILVLKYDARRGLFGVAAVSGRY
ELRNFICEISRNEVYRININKRGFDYGTSFKNLNDVQMGPKFIVEAESTVVISDKAEGMV
YMECIASGIPQPEYKWITYISGEVTQIESKIDPRYTITNGKFTIEDPSEAKDAGVYQCLV
ENSVGAIISAPAQLSFASLGEFPNIQAAPVNPLEYQGAVIECPDIPSRFSQAVVYQWKKS
EEDRYTGDIDKLRKSDVRPDLNNRLFVSGNGKLYFSEVTRDDNFYYYCIATLTTLNLNQN
FMSTTLSPSRTSKPVRLEVRASAGGTYEPRIQDSFINVIPGSPVVGMNISLECFAYGTLP
LTYEWEVPQGVVGRYELTDSNRILKINNVQQDDSGEYSCRVTSSKGSGQQADKKSYVLYV
ESQPDFIVPLTDQHLDKGTRQLTWRCEARAVPFPTYTWYKNAQVIQNSTDGDRLVIGNTL
FLRNLQHERDSGMYQCVAQNSHGVTSTSAQLRILEVKPTFAKFPVPSTMAGAVGGNITIP
CRPEAAPFPEISWYRNGANLNPGTDSGSRLQLTIEGDLKIRDLSMGDQGNYECRAMNELG
EDRNRTFLTIMQRTTIYQPPRPQSVEVNKTAFLYCQASFNQNKLDLIYMWAFNGRVIDIE
RNEHYRRGNTADQEGGLYLIFAQYDHSGMYTCIAQTQVDSANASAALMVTGPPGEPAGVE
AYSASDKISEQVSDELGVGDTDVVLRWTDPVDTHGAPILTYMIYGQTNYSNEWKPLYTYI
PQMNTVIMGSVDSQRRQFLARNLSPGVGYSFKVKAVNMYGVGLESEPTKRTTIPGSHPTK
PPRNVGGGGGSVGTLRMTWDALPPEDHNGWGIGYIVEYRRRPPPGEELTSNIKWNKIEVQ
GNGSEASALVGKDNYYLLYQVKVTAFNKFGVGPTAQNDSVYSAEDMPIGIPSNLYAEPYN
ESAIIVHWDPVPLDRTFMKGQLKGFKIDYWLMSENGSRNSQASQEYIDNRDAALQTVLYG
NVDHGMIIGLQPDTWYTMSVIVFNDAGNGLKSEVVHQSTDKSAPRNYPVHILVFPNEENS
ILVRFRGVSTTVDEEPLLGYKIRYWRDTEDIRNATDIYIGKDTEGTIHKIQEGYLYHLRV
LGYSVGGDGKMSSPETLFTYSRGRVTQVNVDPTTTNVTYVTHDMRGSGRCLTSYIMMIVT
SLLMLITL
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgctgataaggggagatcactgcgaaaaaactaaaagcgccattttgaaaaaaatacag
gtaagttacagatatgtcaaaatgaaagctgtccttttaatcctgatttcaattggtagt
aatctggcacagaactttaacaacttgtttgtgtgcccagatgattggataccaaatggt
gatagatgttaccagttctcttttcagccacgaaattatgatgatgctgcacatatatgt
cagaaaaatggagccatccttctgagtattgatgacattgctgaaaatacatttgtttta
gctcatctcaggaaggtagacaatcaaagacttgaatggtataccagtggagagcgagac
tcttcaacagtaattgctagatatgtgtggacagcaacaaatcaagaaatatcattgaca
tctgacatatggattgacaggaatgaacctatcaacagtgatataacacgggatatactt
gtattaaagtatgatgctagaagaggattatttggagtagcagcggtgtccggaagatat
gaattgaggaactttatatgtgagataagcagaaatgaagtttacagaataaatatcaac
aaacgtggctttgattatggtacatcgttcaagaatttaaatgatgtgcagatgggacca
aagtttattgtagaggcagaaagcacagttgtaatctctgacaaagctgaaggcatggtg
tacatggaatgtatcgccagtggtataccacagccagagtacaagtggataacatatata
tccggcgaagttacccaaattgagtccaaaatagaccctcgttacactataactaatgga
aaattcacaattgaagacccatctgaagccaaggatgctggtgtgtatcaatgtttagtg
gagaacagtgtaggggctataatcagtgcaccagcccaactctcatttgcaagtctggga
gaatttccaaacattcaagctgccccagtaaatccattagagtaccaaggtgctgttatt
gaatgtccagatataccctcaaggtttagtcaagctgttgtttatcaatggaagaaatct
gaagaggatagatatactggcgatatagataaattaagaaagtcagatgtgcgcccggac
ttaaataaccgactatttgtttctggtaatggaaaattgtacttttcggaggtgacaaga
gatgataatttttactattactgtatagccacattaactaccttaaatctaaatcagaac
ttcatgagtacaacattgagtccaagtagaacaagcaaacctgtacgactagaggtgcgc
gctagtgctggcggaacatatgagccaagaattcaggacagttttataaatgttatacct
ggttcaccagtggttggcatgaatatatctctggaatgctttgcttatgggacgctgccg
ctaacatatgaatgggaagttccgcagggagttgttggacggtatgagctgacagatagt
aatcgtattttgaagataaacaacgtacagcaggatgactctggagaatattcgtgccgt
gttaccagtagtaaaggcagtggacaacaggctgacaagaaaagctatgttctttatgtt
gaatcccagccagattttatcgttccacttactgatcagcatcttgataagggaacacga
cagttaacatggcgatgtgaagctcgcgctgtacctttccctacatatacctggtataag
aatgcccaagtaatacagaacagtactgatggggaccgtcttgtcattggcaacacattg
ttcttgagaaatctacaacatgaacgagacagtggaatgtatcaatgtgttgcacaaaat
tcacatggtgtaacctccacttctgctcagctcaggattttagaggtgaagccaactttt
gccaagtttccagtaccatcaactatggctggtgcggtagggggtaacatcacaatacca
tgccgaccagaagctgctccattcccagaaatcagttggtaccgtaatggtgccaacttg
aacccaggaacagattctggttctcgtttacagcttacaatagagggagatttgaagata
agggatctaagtatgggagatcaagggaattatgaatgtcgggctatgaatgagctagga
gaagacaggaacaggacatttcttacaataatgcaacgcacaactatataccagccacct
agaccacagagtgtagaagtgaacaaaactgcattcctgtattgtcaggcttcattcaac
cagaataaactggatcttatatacatgtgggcttttaatggtagagtgatagacattgag
aggaatgaacattatagaaggggtaatacagcagaccaagaaggaggattatacctgata
tttgcacagtatgatcattctggaatgtatacctgtatagcacaaacacaagtagactct
gctaatgcttcagctgcattgatggttacaggtccacccggtgagccagcaggtgtagaa
gcttacagtgcatcagataagatatctgaacaagtatcagatgaattaggagtgggtgat
acagatgtagtcctcagatggacggatccagtagatacacatggtgcacctatacttacc
tacatgatatatggacaaacaaactattctaatgaatggaaacctctgtatacatatata
cctcagatgaacacagtgatcatgggatctgttgattcacagagacgccaattcttggca
cggaatcttagtccaggagtcggatattcattcaaagttaaagcagttaacatgtacggc
gtgggactggaaagcgaacccacaaaacgaactacaataccaggttctcatccaactaaa
cctcctaggaatgttggagggggtggtggtagtgtgggtacactaagaatgacctgggat
gcattaccaccagaggatcataatggatggggtattggttatattgtggagtacagaagg
agaccaccacctggagaggagcttacttctaatatcaaatggaataaaattgaagtacaa
gggaatggaagtgaagcatcagctctggttgggaaagataactactatctgttgtatcag
gtcaaggtcacagcatttaataaatttggagtgggtccaacagcacagaatgatagtgtc
tactctgctgaagacatgccaataggaataccaagtaatttgtatgctgaaccttacaat
gagtcagctattattgtacactgggaccctgttcctctagaccgtacttttatgaagggc
cagctgaaagggtttaagatagactattggctgatgtcagaaaatggatcacgtaattcc
caagcatctcaggagtacatagataatcgtgatgcagcacttcaaacagttttatatggc
aatgttgatcacggaatgatcattggactacaacctgatacgtggtacactatgtctgtt
attgtgtttaatgatgccggtaatggtttgaaaagtgaggtggttcaccagtcaaccgat
aaatcagctccccgaaattatcctgttcacatcctggtttttccaaatgaggaaaattcc
atactggtgaggttccgaggtgttagtacaactgtagatgaagaaccattgcttggttac
aagatacgttattggagagatacagaagatattcgtaatgcaacagacatatatataggg
aaagacacggagggaactatacataaaatacaagaaggttacctatatcatctacgagtg
ctgggatacagtgtcggtggtgatgggaaaatgagctcaccagaaacactttttacttac
tccagaggtcgagtgacacaagtaaatgttgacccgacaacaacaaacgtgacatatgtg
acacatgatatgagggggtcagggaggtgtttgacgtcatacattatgatgatagtgacg
tcactgcttatgcttattacactctaa
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