Ruditapes philippinarum (Manila clam): 132745289
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Entry
132745289 CDS
T09557
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132745289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphi02000
]
132745289
04147 Exosome [BR:
rphi04147
]
132745289
04090 CD molecules [BR:
rphi04090
]
132745289
Enzymes [BR:
rphi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
132745289
Transporters [BR:
rphi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
132745289
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132745289
CD molecules [BR:
rphi04090
]
Proteins
132745289
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
RsgA_GTPase
AAA_29
AAA_7
AAA_14
AAA_16
AAA_5
AAA_15
Rad17
AAA_24
G-alpha
NB-ARC
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
132745289
NCBI-ProteinID:
XP_060590152
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MKGRVTPAEQSDSSSVSGNQNGTEEVSNNQVKPAIDDSPENIPPPPKYQEVVEMNRVSEK
AGDSVAMNGFSATNYDKSVDELPEKSANGGKEDKKDGDTDSKADEKKEEETPMVGLFEVF
RYSTKRDRLFMILGTLCAMIHGTAFPLMIIVFGEMTDLFVNSGKYEYAVDQLVSLGTLAK
LNFTSEQVIKDPDLLEPYLSFITTDTNSTVDISVIKSAITDDLLDTMRTYAFYFIGIGAG
VVVLGYGQVMFWMIASERQTHRIRKNFYKNVMRQNIGWFDTHESGELNSRLTSDISKIHD
GIGDKIGTFVQWFTAFLAGFTIGFIYGWKLTLVIISISPLLAGAAFIMSKLVGMASGAEL
KAYAKAGAVAEEVLGAIRTVVAFGGQEKECERYENNLVEAKSQGIKKGLVNGVSMGVVWM
ILFLAYALGFWYGAKLSRDEPDTYTIGNVLIVFFAVLIGAFSLGNAAPPLQSLAVARGAA
YIVYGLIELDPPIDSYSKKGKKLENFQGSISIQDVHFKYPSRPDTAILQGVNLDINRGQT
VALVGSSGCGKSTIVQLIQRFYDPEQGSIKIDGTDLKDINIKWWREHIGIVSQEPVLFGT
TIGENIRYGREEVSQAEIEEATKMANAHDFITALPDKYDTMVGERGAQLSGGQKQRIAIA
RALVRDPKILLLDEATSALDTESEGVVQEALEKASHGRTTIVIAHRLSTIKTADVIAGFK
DGVIAEKGTHSELMSKNGIYQNLVNRQSMKNEDDAEAELFDAPEKGTPGKKPLTTQHSMI
TFPDHSKKDAGDKKDDKEKEEEEVNSGLMRVLKMNASEWWIIALGCVGSIINGGLMPAFA
VIFAEILGVFAIQDLDEQTRKVNLYVLLFVALAGVSLVSYFLQGYMFGRSGETLTMRLRS
MSFRAMLRQEIAYFDDHDNSVGALCTRLSTDASQVQGAAGAKLGSSFMGLCSILTGLIIA
FIYSWKLTLLIIAFLPLIMIGGALQMQMLAGAAGKNKEALEAAGKIAIESIENIRTVASL
TREKMFRRKFKAELDVPYEEALKKAHVIGISFSVSQGVIFFAYAASFWLGAYLIQQSELD
YVAVFKVFSAIVFGGMAIGEASSFAPDAAKAEQSAKEIFKLLDKEPKIDSYSDKGHKLQE
ENTEEKEKYRSTIAFSDVKFVYPTRPDTQVLTGLNLLVPQGQTVALVGSSGCGKSTTVQL
TERFYDADEGAVYLDGNNLKDLNLKWLRSQIGIVSQEPILFDRSIGENIAYGDNSRKVTM
DEIIEAARKANIHQFISSLPEGYDTSVGEKGAQLSGGQKQRVAIARALVRHPKILLLDEA
TSALDTESEKIVQEALDKAREGRTSIVIAHRLSTIQNADKICVIRHGVVTEEGTHSELMK
KQGFYYKLNMAQQRKK
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcgcgtaactccagctgagcagtctgacagcagttctgtcagcggaaatcag
aacggtacggaagaggtgtcaaataaccaagtgaaacccgcaattgatgatagccctgaa
aatataccacctccgcctaaatatcaggaagttgtcgagatgaacagggtttcagaaaag
gcgggagatagcgttgcgatgaacggatttagcgctacaaattacgataaaagcgttgat
gaactgccggagaaatccgccaatggcgggaaggaagacaaaaaagacggtgacacggac
agtaaagcagacgagaaaaaagaggaagaaacgcccatggtcgggcttttcgaagtcttt
cgctattcaacaaagcgggacagactgtttatgatattaggaacgctatgcgcaatgatt
cacgggacagcgtttccgctgatgatcatcgtgttcggtgaaatgacggacctgttcgtt
aattccggcaagtacgaatatgccgtcgaccagttggtgagtctaggaacactggcaaaa
cttaacttcacatctgaacaagtgatcaaggacccggatcttttagagccatatttgtca
ttcataacaacggacacgaacagtactgtggacatatcagttataaagagtgccattacc
gatgatcttcttgataccatgcggacatatgcattttatttcataggaatcggcgcaggt
gtggtggtactcggatatggtcaggtgatgttttggatgattgcatcagagagacagacg
cacagaatacgtaaaaatttctataaaaacgtgatgaggcaaaacattggatggtttgac
acgcatgaatctggggaattaaactctaggctgacaagcgacatttcaaagatacacgat
ggtattggagacaagatagggacttttgtacaatggttcacagcgttcctggccggattt
acgataggttttatatatggctggaaactaaccttggttataatctccatcagtccgctg
ctcgccggtgccgcttttataatgtctaagcttgtagggatggcgtcgggtgcagagtta
aaggcatacgccaaagccggggccgtcgcggaagaggttcttggtgcgatccgcactgtt
gtagcatttggtggccaagaaaaagaatgtgaaagatacgagaacaacctggttgaggcg
aagagtcaaggcattaagaaaggtttggtgaatggagtctctatgggggttgtgtggatg
atattgtttctggcatacgctcttggtttctggtatggtgcgaaactgtctagggacgaa
cccgacacttataccattggcaatgttctaattgtgttctttgctgtattaattggtgct
ttctccctggggaacgcggcccctcccctccagagtctggcggtagctagaggagcagct
tacatcgtatatgggcttatagagctggatccaccgattgatagttactcaaagaaaggc
aagaagttggagaattttcaaggaagcatttcgatacaagatgtgcattttaagtatcca
tctagacccgatacagcgattttgcaaggtgttaaccttgacattaatagaggtcaaact
gtggccttggtggggtcaagtggatgcggcaagtccaccattgtacaacttatacaaaga
ttttatgatcctgagcaaggctctattaagattgatggtacagacctgaaggacataaat
ataaaatggtggcgggagcatataggtatagtaagccaggaaccagtgctgtttggtacg
acaatcggggagaacatccggtatggccgggaagaagtctcacaggcggaaatagaggag
gccacaaagatggcgaacgctcacgattttatcacggctctcccagataaatatgatacg
atggttggtgaaagaggagcacaacttagtgggggacaaaaacaaagaattgctatcgca
cgtgccctcgtgcgtgaccccaaaatattattactggatgaagccacatctgccctggac
acagaaagtgaaggagttgtacaggaggccctggaaaaagcgagtcatggtaggacaact
atcgtaatagcccatagattatccacaatcaaaacggctgatgtgatagccggttttaaa
gatggcgtaattgcagaaaagggaactcactctgaattgatgagcaagaatggaatctat
cagaaccttgttaacagacagagcatgaaaaatgaagatgatgcagaggctgaattgttt
gatgcacctgagaaaggaacgccaggcaagaaaccactgactacacagcattccatgatc
acattcccagaccatagcaagaaggatgctggtgataaaaaagacgataaggaaaaggag
gaagaagaagtaaactctggtctgatgcgagttttgaagatgaatgcatccgaatggtgg
ataatagctcttggatgtgttggcagcattatcaatggtggattaatgcccgcgtttgct
gtaatatttgctgaaattttaggggtatttgccattcaagatttggacgaacaaacgagg
aaggttaatttatacgtcctattatttgtcgcattggccggtgttagtctcgtctcatat
tttctccagggttacatgtttgggaggtcaggagagacactcaccatgaggctgcgatct
atgtcatttagagccatgttaagacaggaaattgcttattttgacgaccatgacaactcc
gtgggagccttgtgtacacggctgtcaacggatgcttcacaagtacaaggtgcagcaggt
gctaaacttggttcaagttttatgggtctgtgcagtatactgactggtctgatcattgca
ttcatctacagctggaaactgacgctcctcataattgctttcctacctctgatcatgata
ggaggcgctcttcaaatgcagatgttggctggtgctgcaggcaaaaataaagaggcatta
gaagctgctggcaagatagctatagaatccatcgaaaacattagaactgttgcctcactc
actcgagagaaaatgttccgtagaaaattcaaagccgagctcgatgtaccttacgaggag
gcgttgaagaaggcgcacgtgataggaatctctttctccgtctcccagggcgtcatcttc
tttgcctacgcagcctcgttctggcttggcgcatatttgatccaacaatcagaattagat
tatgtcgcagtgttcaaggttttctcagctatagtgtttggaggtatggctataggagaa
gctagttcgtttgcccctgacgctgcaaaagctgaacagtccgctaaggaaatatttaaa
ctgcttgacaaagaaccaaagatagatagctactctgataagggacacaaactccaggag
gaaaacacagaagaaaaggagaagtatcgtagtacaatagctttctcggacgttaaattc
gtatacccgactcgaccggatacacaagtattaacaggattgaatttgctcgtgccccaa
ggtcagacggtggcactggttggaagttccgggtgtgggaaaagcacaactgtacagttg
actgagcggttttatgacgcagacgaaggagcagtgtatcttgatggtaacaatttgaaa
gatttgaacttgaagtggttgaggtcacagattggtattgtgtcgcaggagccgatactg
tttgacagaagtataggagaaaatatcgcgtacggcgataactcacgaaaagtgacaatg
gatgaaattatagaagctgcaaggaaagccaacatacatcagttcatttcctctttacca
gagggctatgacacaagtgttggtgagaagggagcacagctcagcggaggacagaaacag
agggtggccattgctagagccttggtcaggcatcccaaaatacttctcttagatgaggcc
acatctgctctcgatactgaaagtgaaaagattgtacaagaggcattagacaaagcgaga
gagggtagaaccagtattgttattgcccatagactttctaccatccagaacgcggacaaa
atctgcgtcatacgtcatggcgtcgtcacggaggaaggcacacactcggagcttatgaag
aaacaaggattttattataaacttaacatggcacaacagagaaagaaataa
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integrated database retrieval system
