Ruditapes philippinarum (Manila clam): 132745291
Help
Entry
132745291 CDS
T09557
Name
(RefSeq) transcriptional repressor NF-X1-like isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132745291
04121 Ubiquitin system [BR:
rphi04121
]
132745291
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
132745291
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
132745291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
132745291
NCBI-ProteinID:
XP_060590155
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MPPRSFLKLHLQDRRMEGHHYTDENGYGYSYDPNQMYYIDPNMQQADFYQQGQQYGTWQW
QPQGYQPVQQAMYGGYPQQGMNYNYYNQYDNGFVYNQQQGLVNYDGQTAYGRQSVSSRSK
HSYSQNRSKNRQRPEVRHNISSYDTENSNNNAMEANIVSHKETDSDEVSGVNLINKESST
ENSNDATDFKGQDKSRNRGGRFQGTDSRTKKFDSRQQALDRQKGYDRNQRYDKGDRNNSS
VNDWDVAKDEGKLSEDTESGARPKSYRDSRNNFDNRRDRYSEKDRKNVQEGGRNGSKSYG
TDKSHSDSKNNESNDKVSKDFGESDRNDASSPVNDASGKSDGNGKDRKKKKEYQVYSSSN
SPREWQMKPNQSNSPRNAYDRYNYRGQDYNKRHKEYNSQAIERGGDRTKLTVEVTGDGSE
NQDQETASKDDDDSAGDIQGSKNVRDAQRKSKNNGPQRGSRFKQKGKVDESQRGTLIEQL
SKGSYECMVCCESVRASNAVWSCSNCYHVFHLRCIKKWAKSPNAVVSGTEKDGWRCPACQ
NLSFKFPNQYRCFCGKVRDPEVSRMDTPHSCGDVCQKDRGEGCKHPCNILCHPGPCPDCN
ATITKSCDCGKTKQSAKCSQSTVIKCELVCERMLNCGRHFCQAKCHSGPCDKCEKVIVQE
CYGEHENREVVCGSEESFTESYSCKCICSKKLDCGNHECEKPCHIHACDSCTLLPKNTSH
CPCGAKKLTDLSPEPRVSCLDPVPTCGAVCNKVLDCGPAGSPHRCERTCHEGPCGPCNGT
TLLSCQCLFMDKEFKCSEIAKMTEKDHKFLCDKRCNRKKSCGRHKCGQPCCIREEHPCDL
VCGRKLPCGLHKCTEPCHKNNCPPCLMAGFDELTCHCGAEVLYPPIPCGTNPPECFKPCT
RQHSCDHTVRHNCHSEEKCPPCTELTKKMCMGNHVTRANIPCHLTDISCGMKCSKPLPCG
EHSCIRTCHKGPCLEEDQVCQQPCQKKRDLCDHICGAMCHGDTPCPKTACKAKVILKCVC
GHKESETLCSTGGISPDSDYQKLAMQSLKDSIQGIMGASSSVNISKLNQIKQGQARVLEC
NEECAVIERNRRIALALEIQNPDLSSKLGSPSYTDFLKEQAKKDPVFVAGIEKAFADLVQ
SAKQSKQPSRSHAFPSMNMNQRKLVHELAEFYGCQTQSYDYEPKKNVVATAPRDKCWLPS
VTLTALVQRELHPRAPPPIPHLFKEDTLRMTNLATKQSTSVLGGEPSSSSSTPEGWQVIG
KKTKKTSSNSASTSKSAISTIDKFESDLEDICSTGTINYDSLSKESKQALKSEPVVDYFD
FTVN
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgccacctcgaagttttttaaaactgcatctacaggatagaaggatggaaggccaccat
tacacagatgagaatggttacggttatagttatgaccccaatcagatgtattatatagac
ccgaatatgcaacaggctgatttttaccaacaaggtcaacagtatggtacatggcagtgg
cagccgcaaggttaccaacctgtgcaacaagcaatgtacggtggatatcctcaacaaggg
atgaattataactactacaaccagtatgataatggttttgtttacaatcagcaacaaggt
ttggttaattatgatggtcaaacagcctacggtaggcagtctgtgtcgtccagaagtaaa
cattcttattcacagaataggtctaaaaatagacaaagaccagaagttcgacataacatc
tcatcatatgataccgaaaattctaataataatgccatggaagcaaatattgtttcacat
aaggaaactgattcagatgaagtaagtggagttaatttgattaataaagagtcttcaaca
gaaaattctaatgatgcaacagattttaaagggcaggataaatctaggaatagagggggt
aggtttcaagggactgattctcggacaaagaagtttgatagtaggcaacaagcattagac
agacagaagggctatgataggaaccaaaggtatgataaaggagatagaaataatagcagt
gtaaatgattgggatgtagcaaaagatgaaggtaaattgtctgaagataccgaatcggga
gcaaggccgaagtcttatagagattcaaggaataattttgataataggagagacagatat
tctgaaaaagatagaaaaaatgttcaggaaggcggaagaaatgggtcaaagagttatgga
acagataagagtcacagtgacagcaaaaataatgaaagtaatgataaagtttcaaaagat
tttggtgaaagtgacagaaacgatgcaagttctccggtgaatgatgccagtggtaaatct
gatggtaatgggaaggaccggaagaaaaagaaagaataccaggtttattcctcgtcaaat
agtccgagagagtggcaaatgaagccaaatcagtcaaacagcccaagaaatgcatatgat
aggtataattatagaggtcaggactacaataaaagacataaagaatacaattctcaggca
atagaaagaggtggtgataggaccaaacttactgtagaagtaactggtgacggaagtgag
aatcaagatcaagaaacagcgtctaaggatgatgatgatagtgctggtgatatacaggga
agtaagaatgtgagagatgctcaaagaaaatcaaagaataatggaccacagagagggtca
aggtttaaacagaaaggcaaagtggatgaaagtcaaagaggtacattgatagaacaacta
agtaaaggtagctatgagtgtatggtttgttgtgagtcggtgcgcgccagcaatgctgtc
tggagctgtagtaactgttaccacgtctttcatctccgttgcatcaagaaatgggcgaaa
tctccgaacgctgttgtgtcgggaacagagaaagacggttggagatgtcctgcatgccag
aacttgtctttcaaatttcctaatcagtatagatgcttttgtggtaaagtacgagatcca
gaggtgagtcgtatggacacaccgcatagttgtggagacgtgtgtcagaaagatagagga
gaaggttgtaaacacccttgtaacatactatgtcatcctggtccatgtccagattgtaat
gccactatcacaaagtcatgtgactgtgggaaaacaaaacaatcagctaaatgcagtcag
tctacagttatcaaatgtgaactagtctgtgaaagaatgttgaactgtggacgtcatttc
tgtcaagcaaagtgccattcaggaccttgtgataaatgtgagaaagtcattgtacaagag
tgttatggggagcatgaaaacagagaggttgtttgtgggagtgaggaatctttcactgaa
tcctacagttgtaaatgtatttgctcaaagaaactggactgtggcaatcacgaatgtgag
aaaccgtgtcacatacatgcctgtgatagctgcacattgctgcccaaaaatacttcacac
tgcccctgtggtgctaaaaaacttacagacctgagtccagagccgagggtcagctgcctg
gaccccgtaccaacctgtggtgctgtttgcaataaagtgttagactgtggtcctgcaggg
agtccgcacagatgtgagaggacatgtcatgagggaccatgtgggccgtgcaatggaact
accttactatcttgtcaatgtctcttcatggacaaggaattcaagtgttcagaaattgct
aaaatgactgaaaaagatcataaatttctctgtgataaaaggtgcaatagaaagaaatcc
tgcggcagacacaaatgtggacaaccatgctgtattagagaagagcatccctgtgacttg
gtatgtggtagaaaactaccttgtggtctgcataaatgtacggaaccgtgccataaaaac
aactgtcctccatgtctaatggctggatttgatgagttgacctgtcactgtggggccgag
gtgttatacccgcctatcccctgtggtaccaaccctccagagtgttttaaaccatgtacc
agacaacacagctgtgaccatacagtgcgacataattgccatagtgaggagaaatgtcct
ccttgtacagaacttactaaaaaaatgtgcatggggaatcatgtcactagagctaacata
ccatgtcatctgacagatatatcttgtggtatgaagtgtagtaaacctctaccatgtggt
gaacattcctgtatcagaacttgtcataagggtccgtgtttagaagaagatcaggtttgt
caacagccttgtcagaagaaacgtgacctatgtgatcatatttgtggtgctatgtgtcat
ggagatacgccatgtcctaaaactgcatgcaaggctaaggtgatattgaagtgtgtatgt
ggacataaggagagcgagacgctgtgttctacaggcggaatctctccagactctgactat
caaaaattggctatgcaaagtttaaaagattccattcagggcattatgggtgcttcttca
tctgttaacatcagcaaacttaatcaaataaaacaaggacaggctcgtgtgctggaatgt
aatgaagaatgtgctgtaatagagaggaacagacgtattgctctcgctctagaaatacag
aatcctgacctcagtagcaaactgggcagtccatcttatactgatttcctaaaggaacaa
gcaaaaaaagatccagtgtttgtagccggtattgagaaagccttcgctgatcttgttcag
tctgcgaaacaatccaagcagccctcaaggagtcacgcattcccgagtatgaatatgaac
cagagaaaacttgtgcatgagttggcggaattttacggctgtcagacacagagttatgat
tatgaaccaaagaaaaatgtagtggctacagctccaagggataagtgttggttgccgtcg
gtaacactgactgcccttgtacagagggagcttcaccctcgagccccaccaccaatacct
catctctttaaagaagacactctcaggatgacaaacctagcaacaaaacaatcaacatcg
gttctcggaggtgaaccatcatcgtcctccagcactcccgagggctggcaggtgatagga
aagaagacgaaaaagacgagctcgaactccgcttccacatcaaaatcagctatctcaaca
atagacaagtttgaatccgacttggaggacatttgctctacagggactattaattacgac
tctctcagcaaggagagtaaacaggctttgaaatctgaaccggtggtcgattacttcgat
ttcactgttaattaa
DBGET
integrated database retrieval system
