KEGG   Ruditapes philippinarum (Manila clam): 132745318
Entry
132745318         CDS       T09557                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 9B-like
  KO
K14535  transcription initiation factor TFIID subunit 9
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    132745318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rphi03021]
    132745318
Transcription machinery [BR:rphi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     132745318
   Coactivators
    SAGA/TFTC/STAGA complex
     132745318
SSDB
Motif
Pfam: TFIID-31kDa CENP-S CENP-T_C Bromo_TP CBFD_NFYB_HMF Histone LonB_AAA-LID TIP49_C
Other DBs
NCBI-GeneID: 132745318
NCBI-ProteinID: XP_060590193
LinkDB
Position
Unknown
AA seq 230 aa
MAAILKDMGVTEHEPRLINQMLEFTYRYVTDVLDDAKVYSSHGNKKAIDTEDVQLAVQCR
MDHSFTTPPPRDLLLEIARHKNSQSLPLIKPYTGPRLPPDRYCLSAPNYKLVSNKKKLHR
IPIGLPVSSLSGGQRISLTQVQRQSTGKIQIGTPTQPLTVINRPSQVKPIVRVQQGQGLM
QGQVSSGGSLVQTQIMGTNQQVTMVPAPGGQTLLQNINPLKRKIDDDYDT
NT seq 693 nt   +upstreamnt  +downstreamnt
atggcggctatattgaaagatatgggcgtcacagagcatgagccaagactcataaaccaa
atgctagaattcacttatcgttatgtgacagatgttttagatgatgccaaggtctattca
agtcatggcaacaagaaggctatagatacagaagatgtacaattagctgtccagtgtagg
atggatcactctttcacaacacctccacccagagatctactgctggagattgccagacac
aagaattcacagtctcttcctctgatcaaaccatatactggtccccggctacctcccgac
agatattgtctctcggctccaaattacaaacttgtcagcaataagaaaaaattacaccga
attccaattggtttgccagttagttcattgtcaggtggtcagagaatctcacttacacaa
gtacaaagacagtcaacaggcaagatccagataggtacgccaactcaacctcttacagta
attaacagaccatcacaagtgaagcctatagtacgagttcaacaaggtcaagggttaatg
caaggtcaagtaagttctggtggtagcttggtacagacacaaataatgggcaccaatcaa
caggttaccatggtaccagccccaggcggacagacacttttacaaaatattaaccctcta
aagagaaaaatagacgatgactatgatacttga

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