Ruditapes philippinarum (Manila clam): 132745333
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Entry
132745333 CDS
T09557
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132745333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132745333
Spliceosome [BR:
rphi03041
]
Complex B
Other components
Prp19-related factors
132745333
Complex C
132745333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
Nup35_RRM_2
RRM_YTH1
RRM_5
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
132745333
NCBI-ProteinID:
XP_060590209
LinkDB
All DBs
Position
Unknown
AA seq
244 aa
AA seq
DB search
HEKPTDPDDPLADQNIKDRFYGLNDPVADKLMNRYSSMPKLESPEDKTITTLYVGGLGDK
VTEKDLKDYFYQFGEIRSINVVAKQQCAFVQFTSRSSAEAASEKSFNKLILNGRRLNIKW
GKSQGQQGQEKEEEKEEEKNLEPVPGLPGALPHPPGELANNFFNLSGAPPMHPMQMRHPM
PPRGPPHMMPMFIRGPPPPGVRLPPPPPGMMPLRPPPGVMPRGQVPQMHYPSQDPNRMGA
QQNG
NT seq
736 nt
NT seq
+upstream
nt +downstream
nt
acatgagaagccgactgatccagatgacccgttggctgaccaaaatatcaaggacagatt
ctacgggttaaatgatccagttgccgacaagcttatgaacagatattcatccatgcccaa
actggagtcgcctgaagataaaactatcacaacattgtatgtcggtggtctgggagacaa
ggtgactgaaaaagatcttaaagattatttctatcagtttggagaaatacgttcaataaa
tgtggtagctaaacaacaatgtgcatttgtacagtttacatcacgttcatctgccgaggc
agcctcagaaaagtctttcaacaaactcattttaaatgggcggagactgaatattaaatg
ggggaaatctcaaggtcaacaaggtcaagagaaggaagaggagaaagaagaagaaaagaa
tcttgagccggtccctggccttcctggagctttaccacacccaccaggggaattagctaa
caatttcttcaatttgagcggggcaccaccaatgcacccgatgcagatgagacatccaat
gccaccaagaggaccacctcatatgatgcccatgtttataagaggtccacctccgccagg
tgtgagactgccgccccctccccctggtatgatgccgttgagacccccaccaggtgtcat
gccccgtggccaggttccgcagatgcattacccatcccaggacccgaacagaatgggagc
tcaacaaaatggataa
DBGET
integrated database retrieval system
