Ruditapes philippinarum (Manila clam): 132745354
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Entry
132745354 CDS
T09557
Name
(RefSeq) homeobox protein six1-like isoform X1
KO
K15614
homeobox protein SIX1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132745354
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
132745354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_NDX
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
132745354
NCBI-ProteinID:
XP_060590238
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MSDMIFGQERYLAQAYSDMTEFYQVHFRPGNGPTLGPFGDIPPMLHEQPTPTTVGSPNPA
MLPSFGFTQEQVACVCEVLQQGGNIDRLARFLWSLPACEHLHKNESVLKAKAVVAFHRGN
FKELYKILESNNFSPHSHPKLQALWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
DGEETSYCFKEKSRTVLREWYAHNPYPSPREKRELSEGTGLTTTQVSNWFKNRRQRDRAA
EAKDREGLDKGHHGLGLNSPMSSEKSGDSNDGMNGEIKQEPDLQSPQSVYTDLQKALPGG
TIMPGIDMQNSNNTHNSHAQHPVVSMNNGSSHQHHGHDMGQILQEYQTL
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacatgattttcggacaagaacgatacctcgcgcaggcgtactcggacatgacg
gagttctatcaagtgcatttccgaccgggaaacgggccaactttgggaccgtttggagat
ataccgccgatgttacatgaacaacctacgccgacgaccgtcgggagtccgaacccggcg
atgttgccatcgtttggattcacacaggaacaggtagcgtgcgtgtgtgaggtgttacag
caaggtggaaatattgacagactagcacggttcttgtggtcacttccggcttgtgaacat
ttacataaaaacgaaagtgtgttgaaagcaaaagcagttgttgcgtttcatcgcggaaac
tttaaggaattgtataaaattttggaaagtaataatttttcaccacatagccacccgaaa
ttgcaagcgttgtggcttaaagctcactatattgaagcggaaaagttgcgaggtcgacca
ctcggggctgtcggcaagtaccgtgtccgacgaaagtttcctttaccacgaacaatttgg
gatggagaagaaacaagttattgttttaaagaaaaatcaaggactgtcttacgtgagtgg
tatgcacataacccctatccttctcctagagagaaacgggagttatctgaaggcaccgga
ctaacgacgacgcaagttagcaattggtttaaaaaccgacgacaaagagatcgagctgcg
gaagcaaaagacagagaaggattggacaaaggtcaccatggcttgggtctgaactcacca
atgtccagcgagaagagtggagatagtaacgacggtatgaatggtgaaataaagcaagaa
ccggaccttcagtcgccccaatctgtgtatactgaccttcagaaagcacttccgggtggt
acgatcatgccgggcattgatatgcaaaatagcaataatacccataattcccatgcacaa
catccggttgtttctatgaacaatggttcctcacatcagcatcatggacacgatatgggg
caaattttacaggagtaccagacattatga
DBGET
integrated database retrieval system
