Ruditapes philippinarum (Manila clam): 132745401
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Entry
132745401 CDS
T09557
Name
(RefSeq) ribonuclease P protein subunit p40-like
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132745401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132745401
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132745401
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132745401
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
132745401
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
132745401
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
132745401
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
132745401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
132745401
NCBI-ProteinID:
XP_060590297
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MSAPMKNVSSLGKLVFERSSFLNEKEKHKERIVEHSFNSSVHIMLPEYAKIPTSVDNLLD
GQLAYLAKQVPLQTLVDIEFIDGFIKGGSVLMISHGTAIDTDNCVALLPTGKLVLNLCKD
TYQKFGINGQPSHVDKNTGKFVVQVDVLAEKFHPGQKLYDRVKRCLAQLPFFNLLVTWKS
NNEKVCTSSIQNYFVSNNIQCSRVKMSKTLHKFTDMRVPIIDSEILCPSNDQQACGYEEM
FEWLGACAVGIDMYEEDGYVSTYSCPSPNREVKCCVGCQYQGFFHPETVQQTVDLLRKYM
KEKNLPWCSVTVHGFMDTPLSWKYDHGFHRNGDNLYTLLMFRNEDYWMFSGVGGSDICP
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcccatgaaaaatgtgtcctctctgggaaaactagtttttgagagatcttcc
tttttaaatgagaaagaaaaacataaggaacgtattgtggaacattcatttaattcttca
gttcatatcatgctaccagagtatgccaagattcctacatcagtagacaacctgttagat
ggccagttggcgtatcttgcaaagcaagtacctctacaaacattggttgacatagagttt
atagatggcttcattaaaggaggtagtgtacttatgatatcacatggaacagcgatagat
acagacaattgtgttgctctactgcctacagggaaacttgtgttgaacttgtgcaaagat
acatatcagaagtttggtataaatggtcagccgtcacatgtagacaagaatacaggaaaa
tttgtggtacaagtggatgtcttggcagagaagtttcatccaggacagaagctgtatgac
cgtgttaaacggtgtcttgcgcaacttcccttctttaatttattagtcacatggaaatct
aacaatgaaaaagtgtgtacatcttctatccagaactactttgtgtcaaataacatacaa
tgtagccgagtgaagatgtccaaaacgttacataagtttacagatatgagggtacctatc
atagattcggagatactctgtcctagcaatgaccaacaagcatgcggctatgaggagatg
tttgaatggttgggtgcttgtgctgtgggcatagacatgtatgaagaagatgggtatgta
tcaacatattcttgtcccagtcctaacagagaggtgaaatgttgtgttggctgtcagtac
cagggattttttcatccagaaactgtccagcaaacagtagatctactaaggaaatacatg
aaagagaagaacctgccgtggtgcagtgttacagtccatggttttatggacactcccctc
tcctggaaatatgaccatggtttccatagaaacggtgacaatctatacacactactcatg
ttcaggaatgaagattattggatgttttcaggggttggaggcagtgatatttgtccctga
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