Ruditapes philippinarum (Manila clam): 132745492
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Entry
132745492 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5-like isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132745492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132745492
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132745492
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
HECT type E3
132745492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
MLLE
zf-UBR
DUF5867
Motif
Other DBs
NCBI-GeneID:
132745492
NCBI-ProteinID:
XP_060590423
LinkDB
All DBs
Position
Unknown
AA seq
2542 aa
AA seq
DB search
MSAPRLPDCFQKVPKKVTIVENGQILAVAVDCEGIHVIARSGVRLNYIVYNLSSGKIERD
SPFPTEAQAFMGSHRSDITLHNTGEESFVQLRDGNGALYPFAKDCNEGIKDPMWLDLPPV
RCLGIRTHYLRDVVTSAQKNKAMVLVLAIEHQTLIPHILRCDVEKVKTVLATLELDASNQ
KVVQDLLQEHCDGNRNILHTCVAMSVPTSNKDSDRNAPVGPSSTTTVTSTSSGYTSTLEV
MNAVTSAVDALTAIQSSRGGPSTGPSADTSGRGVSLREMMRRASSAARAVSGLDVREQEE
GMAIPTLSWPPDPPSYESVIRQDIDKPSLSRQSSSGQSASYPLPSEFSTINIPAVKLDEK
ERPNASLQILKCLCESNILKPHLRDLLSAKNAEGCTPFMQAVKGRAYMAAMTLLDTIKRV
GTSKDSQDVDKATMMSMLYPTGSSLDNSPLHVLCCNDTCSFTWTGAEHINQDIFECRTCG
LLGSLCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKALIAGQQGPRLDLLNRLLV
ETDLVTLTNSRGENILLFLVQTVGRQLVEQRQYRPNRTRVTSAAPRKAPNNDLDVEMPEH
DLEPPRFSRRALERILNDWTAVKAMLLSGMRSKRGTNPDVVYEEQLYLESQSGTARLDKF
THCLLVKCSVEMLDTLLTTLIREMRNETTEGRKAEAKMVARRFIRSVARIFVVLNVEMTP
NSGKKKSPGIPSCQPLVKCKRAFQALINIAVEELCEIANSLIAPVRLGAARPTAPFSLVA
ANVEAVQGSEEIFSVDPLPPKTSSVDEAAHSVSYVTHSVPDRDMPSDRENLDAGDRDEEE
LMPVDIEEDIEVVGGILMGNDDGHQSDNDDRQSEHSEHEQQPPEQDDVAESDMDLDLLAE
SESDSESMHSNQDNVSVQRSAVTMATAGSDAGMGSLAHFSDSGESSNQEDEYESEGGDSE
EHEGEDLGTLDEQLERRNNAAANQGQRTLQAPQTMQWAIRQREPQSSTRAPPAVATTTAT
TAGGGSSLIYIDPSNLRRTTVTTAAAVTPEAPITMATTCSQLARSFGIVVRQIADLLTML
QDYHALAPTLPRILDISDQEALELQLYLEYQLKPTWDWLITILDSTEAQLRFGSALSNTS
DPANPSHPLCHVRTARERTRREETPILQVVDTRRRQRFGALGGTTDHGNNARRDFLNYAL
SLMRSHNNEHSDSLPVIDIASLRHVAYVFDALIYYMRSGTDTDTDVLRDGISVISWQEHD
ENENDDHDDDLNNAMSMDTESIDGDGEMSGKQGRKHTFFQRSDSTLFLGCPPPDPFQTPL
VQALPLADQPHLLQPNARREDLFGVAKQTIVPNSTVDEKTVPGSESVLDKLPLHLSLSAR
VPESQSGASGKLQTDNQSSVPSGFNDNQSNTGASVIVRSATYQPAPVWDSGDPSISSPFF
SSAYDSSVQSARPTSQGETSSVPPAVQSGSPTVRSIYPVVNVSTTPQASSERAEVHQPSV
IVHSSTAISANVSVANISSASMGVNLLSASSPIFNVSDPLPSDLRTTAVNIPLTSESVIT
SAPSPSRASTSTPVIMQPAGSVQGVGNTESPVSMVMTPVTSDVSQSQGSAAVSRQSPSRN
QASTVSLERDLALSSQETSLDLSTNQSRSATLSSDASAADNSQSTQPVPMDMSISLETPS
RRTQSYSDHAGSSGVTGVGNTTGSMALSLGSSGPLQSQLSGSSGVTEYSVTGESPVRPGT
RSDSLPSSSTLGSQGAMSAAPSLPESSPITPPGHGISGSSLSQTDSSYPENASSLEMGSL
DLSRVESRSLDLSSGRSSDAPSSQVPGSSQAPDVPLSMDTDGSLDLSKSAAALTTLQQVP
ARPPTATANTSSTDTPMDMVGANENVSNTVVIETSQGAQAVSRQPPTRSQMISHDALLGR
WRLALDLFGRVFCDDVGAEQGSVISELGGFPVKESKFRREMEKIRNSQQRDLSLEVVRSR
NQLITQSFKQLNTYFNRRTNTSGPPLAVHRVKVTFTDEPGEGSGVARSFYTALANAVLSQ
EKLPPLESIMIGSKSLQYNLIQRLRTRERERERERERQRTSSSQRRSSRERDSRRTLSYD
APPFYMPSDANPNPSSNPEPPPEGSSDTMTQYRRQLGERLFPRVRALQPALAPKITGMLL
ELSPAQLIVMLTSEETLRQRVDEAVDICMSHNTREQRTLNAEALLDLDIFNLSSSGNNSN
KKKKPASQTDRRSDIDDEDDLEDNAPLFWQPGKRGYYSLRPGKGSPERLNAFRNVGRILG
LCLLQNEMCPLFMNRHVLKYILGRKIGWHDLAFFDPVMYESLRQLVLDSETKDASLMFQA
LDMNFCVELCAEEGGEQVELVPGGTDIEVTAQNVHDYVRRYAEYRMVKVGEKALKRLRMG
VFDVIPSNSLEGLTSEDLRLLLNGVGTISVQTLISYTSFNDESSESNEKVQRFKRWFWSV
VEKMNNIERQDLVYFWTSSPALPASEEGFQPMPSITIRPADDDHLPTANTCISRLYIPIY
TTKQILKTKLLLAIKTKAFGFV
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaccaaggttgccagactgcttccagaaagttcctaagaaagtaactattgta
gagaatggtcagattctagcagtagctgtggactgtgaagggatccatgtgattgcaaga
tcaggagtgcgtctcaactacatagtgtacaatctgagctccgggaaaatagaacgtgat
tccccgttcccgacagaggctcaggcgttcatgggaagtcatagaagtgatattaccctt
cataatactggagaggaatcatttgtgcagcttagagatggtaatggtgccctgtatcca
tttgctaaagattgtaacgaaggaatcaaggatcctatgtggctggacttgccacctgtc
aggtgtctagggatccgaacccactaccttagagacgtggttacgtcagctcagaagaac
aaagccatggtactggttcttgccatagagcatcagacgttgataccacatatactacga
tgtgatgtagagaaggtgaaaacagttttagctaccctagaacttgatgccagtaaccag
aaggttgtgcaagacctattacaggaacattgtgatggtaacagaaatatactgcatacg
tgtgttgctatgtcagtgcctacatctaacaaggacagtgatagaaatgctccagtgggg
ccgagcagtacaactacagttacaagcacgtctagtggttacacgtccacactagaggtg
atgaacgcggtcacaagtgcggtagatgccctcacagctatacagtcgtctagaggcggg
cctagtaccggacctagcgcggatacttccggccgaggtgtgagtttaagggagatgatg
agaagagcgtcgtctgctgcccgtgctgttagtggtctagatgtgcgtgagcaggaggaa
ggcatggctataccgacactgagctggccgccagatccaccgagctacgaatctgtcatt
cgtcaagatatagataaaccgagccttagtcggcagtcgtcaagcggtcagtcagcctct
tatcctctaccctcagagttcagtaccatcaacatacccgcagtgaaactggacgagaaa
gaaaggcccaatgcatcgttacagatcctgaagtgtttgtgcgagtcgaacatactaaaa
cctcatctacgagatctgttgtctgcaaaaaatgcggagggttgcacacctttcatgcag
gcagtgaaaggtagggcgtacatggcagcgatgacactactggacacgatcaagcgtgtc
ggaacgtccaaggacagccaggacgttgacaaagccaccatgatgagtatgttgtacccg
acaggttcgagtctcgataactcgcctctacacgtcctctgctgtaatgatacttgcagt
tttacctggacaggggcggaacatattaatcaggatatatttgagtgtcgtacttgtgga
ctgctggggtcgctttgttgctgcacggaatgcgctcgtgtgtgtcacaaaggacatgat
tgcaaattaaagcgtacttcaccgactgcttactgtgactgctgggagaaatgtaaatgt
aaagctctgatagctggtcaacaaggacccaggctggatcttctgaataggcttcttgtt
gaaactgatcttgttacgctgacaaacagcaggggagagaatatcctattgttcctggta
cagacggtaggtcgacagttggtggaacaacgtcagtacagacctaacagaactagagtt
acctcagctgcaccaaggaaagctcctaataatgatcttgatgttgaaatgcctgaacat
gacctggagccacctagattcagtcgtcgagccctcgagcgaatcctcaatgactggaca
gctgtgaaagccatgttactgagtggcatgcgtagtaaaagaggcactaacccagacgta
gtatatgaagaacagctgtacctagagagtcagagtggaacggcaagacttgacaagttt
acacactgtttacttgtgaaatgcagtgttgagatgctagatacattattgactactttg
ataagagagatgaggaatgagacaactgagggcaggaaggctgaggccaagatggtggca
cgaagatttattcgctcggttgctagaatatttgttgttcttaatgtagagatgacccct
aattctggtaaaaaaaagagccctggtataccttcctgtcaacccctggtgaagtgtaag
agagcgtttcaagctctgatcaatatagccgtggaggagttgtgcgagatagctaactct
ctgatagcccctgttcgacttggagctgccaggcccactgcacctttctcattggtggct
gcaaatgtcgaagctgttcagggaagtgaggagatatttagcgtagacccactgccacct
aaaacttcttctgttgacgaggctgcccactccgtgtcgtacgttacccacagcgtgccg
gaccgagacatgcccagtgacagggagaacctcgatgctggagatagggacgaggaagaa
ttgatgccggttgacattgaagaagacattgaagtggttggtggtatattgatgggaaac
gatgacggccaccagtcggataacgatgacaggcagtcggaacattccgagcatgaacaa
cagccgccggaacaggacgacgttgccgagagcgacatggacctagacctgctcgccgag
tcggagagtgatagcgagagtatgcacagtaaccaagacaatgtcagtgtacagagaagc
gctgttaccatggcaacagcaggatctgatgctggtatgggaagcttggctcatttctct
gactcgggagaatcgtccaaccaggaggacgaatatgaaagtgagggcggggacagtgag
gaacacgaaggggaagaccttggtaccctcgatgaacaacttgaacgtagaaataatgct
gcagccaatcaaggtcagaggacattgcaggctccgcaaacaatgcagtgggcaattaga
cagagagagcctcagagcagtacccgggctccgccagctgtagccacaactacagccacc
accgcaggaggtggaagcagtttgatttatatagacccctcaaatcttcgccggacgact
gtcacaacagctgctgccgtgaccccggaggcacctatcaccatggcaaccacatgcagt
cagctggcaaggtcgttcggcattgtggtgcgtcagatagccgaccttttaacaatgtta
caggactaccacgcccttgccccgacgttacctaggatactggatatatcagatcaggag
gccctagaactccagctgtatttagagtatcagttaaagccaacatgggactggctgatc
actattcttgactcgactgaggcccagctgagattcgggtctgccctgagtaacacatca
gaccctgccaatcccagtcaccctctgtgccatgtaaggactgcccgggagcgtactcga
agagaagagacaccgattttacaagtggttgatacacggcgacgacaaagatttggtgcc
cttggaggtaccactgaccatgggaataatgcaaggagagattttctaaactatgcctta
tctttaatgagatcacataacaatgaacattcggactccttaccagttatagatattgca
tcgttacgtcatgtggcatacgtatttgacgctctgatttactacatgaggagcggaacg
gatacggacacagacgtccttcgtgacggtatatctgtgatatcgtggcaggagcatgat
gagaacgagaatgatgatcacgatgacgatttaaacaatgcaatgtctatggacacagag
agtatagacggcgatggcgagatgtctgggaaacaaggtcgcaaacatacgtttttccag
aggtcagattcaactttatttctgggttgcccgccacccgatccttttcagacaccactt
gttcaagcattgccattggctgatcagccacatcttctgcagccgaatgcaaggcgggag
gatttgttcggtgttgctaagcagactattgtcccgaattccacagtggatgaaaagact
gtacctggtagtgaaagtgtgctagataaacttccgttgcatttatctttatctgctaga
gtgcctgaatcacagtcgggagcttctggtaaattgcagactgataaccagtctagtgtt
ccaagtggatttaacgataaccagtctaacacaggtgctagtgtaattgtacgttcagca
acatatcagccagcaccggtctgggattccggcgacccttcaatatcatccccgtttttc
tcatcagcatatgattcaagtgttcagtctgctagaccaacctcacagggcgagactagt
agtgtgccacctgcagtgcaatccggttctccaaccgttcgaagtatttatccagtagta
aacgtttcaacgacgccacaggcatcgtcagaaagggcggaagttcaccagccaagtgtc
atagttcactcaagtacagcaatttcagctaatgtttctgttgcaaatatatcgtctgct
agcatgggagttaacttgctatcggcaagttcccctatatttaatgtcagtgaccctctg
ccaagtgatttgagaacaactgctgtaaatataccattgacttccgaatctgttatcaca
tctgccccatctccttcaagagcatctacctccaccccggtaattatgcagccggctgga
agtgtgcaaggggtgggtaacaccgaatctcctgtatcaatggttatgacacctgtgacc
tcagatgttagccaatcacaaggctctgcagcagtttctagacaatccccatctagaaat
caagcatctacagtatcacttgagagagatttagccctatctagtcaagagaccagttta
gatctcagcactaatcagtcaaggtcggccacattgtcgagtgatgcaagtgcagcagac
aactctcaaagtactcaacctgttccaatggacatgtcaatctccttggaaactccatct
agaaggactcagtcatactccgatcatgcagggagcagtggtgttaccggggtcggcaac
acgactggtagtatggcattgtcacttggaagctctggtccattacagtcacaactgtcc
ggcagtagtggtgttacagaatatagcgtgacaggcgagagccctgttcgaccaggtact
aggtcggactctttacccagcagttccacattaggtagccagggagcaatgtctgctgca
ccaagcttgccagagtcctcgccaatcactcctccaggtcatggaatatcgggctcgagt
ctttcacaaacagactcatcatatccagaaaatgctagtagcttggaaatgggaagccta
gatctgtcacgtgttgaaagtaggagcctggatctgagttcgggtaggtctagtgacgcc
ccgtcaagccaggtacctggctcaagccaggctccagatgtgccattgagtatggacact
gatggttcccttgatcttagcaagtctgcagctgctttgaccaccctgcaacaggtaccg
gcacgacctccaactgctacagcaaacacaagttctaccgatacacctatggacatggta
ggagccaatgaaaatgtctctaacactgttgtcatagaaacatcgcaaggtgcacaggct
gtgtcaagacaacctcctacacgttctcagatgatatcccatgatgctttgctgggaaga
tggcggctggcgctggatctgtttggccgcgtattctgtgacgacgtaggggcagaacaa
ggttcggttattagcgagctaggaggatttcctgtgaaagagagcaaattccgtagagag
atggaaaagatacggaactcgcaacaacgtgatcttagcttagaggttgtaagatcaaga
aatcagctcatcacccaatcttttaaacagttaaacacgtactttaatcgaaggactaat
acaagtggaccacctctggcagtacatagggtgaaggtgacatttacagacgagccaggt
gaaggaagtggtgtagccaggagtttctatacagctttggcaaatgcagtgctatcacaa
gaaaaattacctccccttgaaagcataatgattggcagcaaaagtttacaatacaattta
attcagcgtttgagaacaagagagagggaacgagagcgggaacgcgagaggcagcgaacg
tcgtcatcacagagacgtagcagtagagaacgtgactcacgtcgcacactctcctacgat
gctccaccattttacatgccatctgacgcgaatccaaatccttccagcaatccagagcca
ccaccagagggcagcagtgatacaatgacccagtataggcgacagctcggagaacgattg
ttcccgagagttagggctcttcaacctgcgctggcacctaagataactggtatgttgtta
gagttatccccggcccagttaatagtgatgttaacatcagaggagaccctaagacaacgt
gtggatgaagctgtagatatctgtatgtcccacaataccagggaacaaagaacattgaat
gccgaagcattgttagatttagacatcttcaacctgtcctcatctggtaacaattctaac
aagaagaagaaaccagcatcacagactgacagacgtagtgacattgatgatgaagatgat
cttgaggataatgcaccgttgttctggcaacctggtaaacgtgggtactactcgttacgt
ccggggaaaggttctcccgagagattgaatgcatttagaaatgtgggcaggattttaggt
ttatgtcttctgcaaaacgaaatgtgtccgttgtttatgaatcgtcatgtgctgaaatac
attctcgggagaaagataggctggcacgatctggcgttctttgatccggtcatgtacgag
agcttacgacaactcgtcctagactcggaaacgaaagacgcgtcactaatgtttcaggct
ctagatatgaacttctgtgtagaactttgtgctgaggagggcggagagcaagtagaactt
gtgccaggaggaacggacattgaagtgaccgcccagaatgtacacgattatgttcgtagg
tatgctgaatatagaatggtcaaagttggagaaaaagctctcaagaggttaagaatgggc
gtatttgatgtgataccatctaactcgttagaaggtctgacatcagaggatctccgactg
ttgttgaatggtgttggaaccatcagtgtacagacacttataagttatacatcatttaat
gatgaaagtagtgagagtaacgagaaggtacagaggtttaagcgctggttctggtcagtt
gtagaaaagatgaacaatatagagaggcaagatttggtatacttctggacgtcgagccca
gctcttccagcgagcgaggaaggtttccagccgatgccaagtatcacaatacggcctgcg
gatgacgaccaccttcccacagcaaatacatgcatatctagactctatatcccaatatat
actacaaaacaaatcctgaagactaaactattacttgccatcaagactaaagcttttgga
tttgtataa
DBGET
integrated database retrieval system
