Ruditapes philippinarum (Manila clam): 132745530
Help
Entry
132745530 CDS
T09557
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
132745530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132745530
Membrane trafficking [BR:
rphi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
132745530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Fusion_gly
5_nucleotid
Spectrin_1st_PEPL
Med2
Motif
Other DBs
NCBI-GeneID:
132745530
NCBI-ProteinID:
XP_060590463
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
MSSEKFENLEDDLSSAIDKLRPHVDSISSYTGEQKKNAVRQAEKKLEEANFIIQELENEA
KAAPIQYRTQMLSRLRTYRRNLDQLSKDVKRKNESGLYQADNFGFDRDDRLEASQRNRLL
QGHQALNRTSESIARSHQIAAETEDIGTETLVELGRQREVLTRTKDRLHDTDANLGKSRK
ILKTMAMRMMTNKMILIVIIILELGILGGVVYWKFFS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagagaagtttgaaaatttagaagatgatttgtcttcagctatagataaactt
cgcccacatgttgatagtatttccagttatacaggagagcaaaagaaaaatgccgtacgc
caagcagagaagaaacttgaagaggctaatttcattatccaggaattggaaaatgaagca
aaagctgctccaatccagtacagaacacagatgttgagtcgccttagaacatacagacgt
aatcttgaccaactttcaaaagatgtgaagcgaaagaatgaatcaggactttatcaagct
gacaattttggctttgacagggatgataggctagaggcatcacagaggaataggttgtta
cagggtcaccaagcactgaacagaaccagtgagagtatagcacgatctcatcaaattgca
gcagagacggaggatataggtacagaaacactcgtagagctaggtagacagagagaggtt
ctgacacgtacgaaagataggttgcatgacactgatgcaaatttaggcaagagcagaaaa
atattgaaaacaatggcaatgaggatgatgaccaacaagatgatattaattgtgataatt
atattagaacttggaatattaggtggtgttgtttactggaaattcttctcttaa
DBGET
integrated database retrieval system
