KEGG   Ruditapes philippinarum (Manila clam): 132745596
Entry
132745596         CDS       T09557                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rphi04121]
    132745596
Enzymes [BR:rphi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132745596
Ubiquitin system [BR:rphi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132745596
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-RING_5 zf-C3HC4_2 zf-C3HC4_3 Prok-RING_4 zf-UDP zf-rbx1 Rad50_zn_hook zf-C3HC4_4 zf-C3HC4_5
Other DBs
NCBI-GeneID: 132745596
NCBI-ProteinID: XP_060590535
LinkDB
Position
Unknown
AA seq 203 aa
MSSRRRSSGSRGRVSGIRNRRRLRSAAGSNTDMQEPIVVEDHVGDESCIDLTSTLDDEFV
DLTSSQRSHNDTELHGANDNSVVIIGTPNASPPARRRGHRSLPRPLEIDDDDSNDLPPVP
FDLPNAVPSSSSCNIKSPDPIKITCPVCLDDDKTIKKGKRKLVTTTCGHVYCQPCVESSI
KNQHCCPVCRKRLTLKNIFVLHI
NT seq 612 nt   +upstreamnt  +downstreamnt
atgagttcaagacgaagatcttcaggaagtagaggaagagtgtctggaatcagaaaccga
cgtagattgaggtcagctgcaggatcaaatacagatatgcaagaaccaattgttgtagaa
gatcatgttggcgatgaaagttgtatagatctgacctcaacattagatgatgagtttgtt
gatctaacatcaagtcagagatctcataatgatacagaattacatggagcaaatgataac
tctgtagtgataattgggactccaaatgcttctccaccagcacgtagaagaggtcataga
agtttacctcgtcctctagagattgatgatgatgacagtaatgatttaccacctgtacca
tttgatttacccaacgctgtaccatcttccagtagttgtaacatcaaatcaccagatcct
atcaaaataacatgtccggtttgtttagatgatgataaaacaattaaaaagggcaagaga
aagttggtcacaacaacatgtggccatgtttactgccagccatgtgtggaaagttcaata
aaaaatcaacactgctgtcctgtttgcaggaaaagattaacattgaaaaacatatttgtg
ctgcatatataa

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