Ruditapes philippinarum (Manila clam): 132745596
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Entry
132745596 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132745596
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132745596
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132745596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
Prok-RING_4
zf-UDP
zf-rbx1
Rad50_zn_hook
zf-C3HC4_4
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
132745596
NCBI-ProteinID:
XP_060590535
LinkDB
All DBs
Position
Unknown
AA seq
203 aa
AA seq
DB search
MSSRRRSSGSRGRVSGIRNRRRLRSAAGSNTDMQEPIVVEDHVGDESCIDLTSTLDDEFV
DLTSSQRSHNDTELHGANDNSVVIIGTPNASPPARRRGHRSLPRPLEIDDDDSNDLPPVP
FDLPNAVPSSSSCNIKSPDPIKITCPVCLDDDKTIKKGKRKLVTTTCGHVYCQPCVESSI
KNQHCCPVCRKRLTLKNIFVLHI
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagacgaagatcttcaggaagtagaggaagagtgtctggaatcagaaaccga
cgtagattgaggtcagctgcaggatcaaatacagatatgcaagaaccaattgttgtagaa
gatcatgttggcgatgaaagttgtatagatctgacctcaacattagatgatgagtttgtt
gatctaacatcaagtcagagatctcataatgatacagaattacatggagcaaatgataac
tctgtagtgataattgggactccaaatgcttctccaccagcacgtagaagaggtcataga
agtttacctcgtcctctagagattgatgatgatgacagtaatgatttaccacctgtacca
tttgatttacccaacgctgtaccatcttccagtagttgtaacatcaaatcaccagatcct
atcaaaataacatgtccggtttgtttagatgatgataaaacaattaaaaagggcaagaga
aagttggtcacaacaacatgtggccatgtttactgccagccatgtgtggaaagttcaata
aaaaatcaacactgctgtcctgtttgcaggaaaagattaacattgaaaaacatatttgtg
ctgcatatataa
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