Ruditapes philippinarum (Manila clam): 132745757
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Entry
132745757 CDS
T09557
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132745757
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132745757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
BRCT_2
LIG3_BRCT
ResIII
BRCT
DEAD
SWI2_SNF2
ERCC3_RAD25_C
CCDC47
AAA_22
BRCT_3
DUF6739
Motif
Other DBs
NCBI-GeneID:
132745757
NCBI-ProteinID:
XP_060590715
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MESDSENEETSSAAENRRKYISSAEDLKSYGWGDMSLRSYQIVGVNWMIDRYNQGNGCIL
GDEMGLGKTCQTIAVLAYLHTKCKKKLPNLVVCPRSVLENWDQEVKRFAPGLRRQVYIGE
KESRQDLAKSIRSDHRKNDLKFDVLITTYEICLKDSAFLNSIHWNILVVDEAHRLKNLNS
LLYKTLSQWDFHTTILLTGTPVQNNLQELYALLSFVSPKKFPTDNHEEFVARFSKIKQSG
KKSSELHKLLKPYLLLRRKSEVLKDLPEKSEVVLTHGISKLQAKLYKGILVKDTDIFESI
GPSSSVKQTTSLMNILMQLRKCVNHPYLFDGIEPEPFMLGEHLVEASGKLVVIDKLLKYL
HNTGHKVLMFSQMTHMLDVLQDYLGYRGYTYERLDGSVRGEERFLAVQNFNSNDETFVFL
LSTRAGGQGINLTSADTVIFVDSDFNPQNDLQAAARAHRIGQSRPVKVIRLVSKNTVEEI
ILKRAEEKLELTSTVIKEGEFSLGASKQSLFTDDKIKLQDILKYGVDELLSGNHGDDVDL
DFKAILGPTADGEWQPEETKVDEEANGSEDEGILEDAPQTMYMFEGTDYSKEPTAADKKA
FDELLEAERAVLSEKLAEDRPSRLKRQPLSVFMPGLPDVLRKPRKKLTPEELAERKKKRE
EAAAKRAKEAEEREMRRAQEQRKRREELWKKNDYKSCNVEIDETSDDDEGMLDDDDISGD
VTPHDIKYVLGDVTHPKKTDRENNIIVHCADDSGNWGTGGLFSALSARSSRPEDQYTLAG
KMQDLALGDCHMVPFDAGSSSKDGKDWVALIIAQHRDKRNNLSGIKLSALRYGLEKVYVK
AKENNASVHLPRIGHTTVGFNWYGTEKLIKKHLASKGIPTYIYYFPRRHQKRKAVTVTSN
DGPPAKVVKDAPIASTSKTLAQKEGGGLSNIFSGSVIYLHKDGLSEEDFKKYKRLIIAYD
GDVETTVSNRTTLIVIPQDCDRQTIVDLSDKQDGVPIVTTEWIDDCMERKKRIKTENYEI
S
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgacagtgaaaatgaagaaacttcctcagcagcagaaaatagaagaaagtac
atatcttcagcggaagacctgaaatcttacggatggggagatatgtctctgcgctcatac
cagattgttggagttaattggatgatagacagatacaatcaaggaaatggatgtatacta
ggagatgagatggggttgggtaaaacatgccagactatagcagtgttagcgtatctacat
accaaatgcaagaaaaaactaccaaaccttgttgtatgtcctcgttctgtgctcgagaat
tgggaccaggaagtaaaaagatttgcacctggtttgagacgtcaagtttacattggtgag
aaggaaagtcgacaggatctggcaaagtctatcagatcagatcacaggaaaaatgacctc
aagtttgatgttcttatcactacatatgaaatttgcctgaaagactcagctttcctgaac
tctatccactggaacatattagtggtagatgaggctcatagactgaaaaatctcaactct
ttactctataaaacattgtctcagtgggatttccacaccactatattgctgactggcaca
cctgtacagaacaatctacaagagttgtacgcacttcttagctttgtttcaccaaagaag
ttcccaactgacaaccatgaagaatttgtggcaagattctccaaaattaagcagtctggg
aaaaaatcatcagagctacataagttactgaaaccatacctattgttgaggagaaaatcg
gaagtattgaaggatctaccggagaaatctgaggtggttcttacacatggtatatctaaa
ctacaagctaaactatataaaggcattctagtaaaagatacagacatatttgagagtata
ggaccttctagtagtgtgaagcagacgacaagcttgatgaatattttgatgcagttaagg
aagtgtgtcaaccatccatacctctttgatggtattgagccagaaccatttatgttagga
gagcaccttgtagaagcaagtggtaaattggtcgttatagacaaactgttgaagtattta
cacaatactggacacaaagtactgatgttttcacagatgacgcacatgttggacgtgtta
caagattaccttggatacagaggttatacatatgagcgtctggatgggtcagtgagagga
gaggaacgtttcttggctgtacaaaactttaactctaacgatgaaacttttgtctttctc
ctgagcacaagagctggtggacagggtataaatttgaccagtgctgatactgtgatattt
gtggacagtgattttaacccacagaatgacctgcaagctgctgccagggcacataggata
ggacagtcaagaccagtaaaggtgatcagattggtcagtaagaatacagtggaagagatt
atactgaagagagcagaagagaagctagaattaactagtacagtaataaaagaaggagaa
ttctcactgggagcttctaaacaaagcctctttactgatgataaaattaagcttcaggat
atactaaaatatggtgttgatgaattattaagtggtaaccatggagatgatgttgacctt
gatttcaaggctattcttggacctacagcagatggtgaatggcagcctgaggaaacaaaa
gtggatgaagaagctaatggatctgaggatgaaggtattttagaggatgcaccacagact
atgtacatgtttgagggaactgactactccaaggagcctactgcagctgataaaaaagcc
tttgatgaactgcttgaagctgagagagcagtattgtcagagaagctggcagaagataga
ccaagtcgtttaaagcgtcaacctctgtctgtattcatgccaggtctaccagatgttctg
agaaaacccagaaagaaattgacaccagaagaattagctgagaggaagaaaaagcgtgaa
gaagctgcagcaaagagagctaaagaggcagaggaaagagaaatgaggcgggcacaagag
caaagaaaaaggagagaggaactgtggaagaagaatgattacaagtcatgtaacgtggag
attgacgagacctcagatgatgatgaaggaatgctagatgatgatgatatatcaggggat
gtaactccacatgatataaaatatgtactaggggatgtaactcatccaaagaaaactgat
agagaaaacaatattattgtccattgtgcagatgattctggaaactggggtaccggaggt
ttattctcggcactatctgcccgatcatctagaccagaggatcaatatacactagctggt
aaaatgcaggatttagctcttggagattgtcatatggtaccttttgatgctggttccagc
agtaaagacggcaaagattgggtagcacttattatagcccaacatcgagacaagaggaac
aacttgtctggtataaaattgtctgccctcagatatggactagaaaaagtctatgtgaag
gcgaaggaaaacaatgcaagtgtacatcttcctcgtattggacatacaactgtaggtttt
aactggtatgggacagaaaaactcatcaaaaaacatctagcctcaaaaggaattcctacg
tatatatattactttccaagaagacatcagaaaaggaaggcagtcactgtaaccagtaac
gatggtcctcctgcaaaagttgtcaaggatgctccaattgcttcaacaagcaaaacattg
gcacagaaggaaggtgggggtttatcaaatattttctcagggtctgtgatatatctacac
aaagatggcctatctgaagaagatttcaagaaatacaaaagattaatcatagcctatgat
ggtgatgtggaaacaactgtctcaaacagaactactctaattgtcatacctcaggattgt
gatcgtcagactattgtggatttgtctgacaaacaagatggcgttcctatagtaacaaca
gaatggatagatgattgcatggaaaggaagaaacggataaaaactgaaaactatgaaatc
agttga
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