Ruditapes philippinarum (Manila clam): 132745865
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Entry
132745865 CDS
T09557
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132745865
Membrane trafficking [BR:
rphi04131
]
Protein recycling
Others
EARP complex
132745865
Endosome - Golgi transport
Tethering complex
GARP complex
132745865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
COG6_N
DUF4795
CA109-like
Wtap
DUF5740
COG2_N
Spectrin_1st_PEPL
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
132745865
NCBI-ProteinID:
XP_060590852
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MFAASEVKNFQAGIQPNKMEPDSCHRTREVEGIALNLGELDLTSDDFLLEEVDVHIQENL
EDEFVKEALKTGVDLRQYSKQIESELLQVENASIQDYIKESENIASLHKQIAACDTILER
MEEMLNGFQSDLSSISTEIQSLQEQSIAMNVKLKNRQSIRGELSQFVDEMVIPESMINHI
LDTPVTEREFLEQLHELNHKINFVKEQSFRDAKSCLDVRDILEKLKIKAIAKIREFLLMK
INSFKKPMTNYQIPQDTMLKFRFFNEFLMTNERHVAKEVRDEYMDTMSKIYFSYYKGYLS
RLMKLQFEEGATKDDLMAVDETAKKGFFTSKSTLKNRSTVFTVGNRGDVLTTELEAPIIV
PHAAQKSENRYTFESLFRSLHFALMDNACREYLFLTDFFMASGTSAIDLFNTVFGKTLSI
YLKSMEEHINECYDSIAIFLSIHIVHRFRSIMENRGVPALERYWDSVLHVMWPRFEYILV
LNIQSVRDCDPEKLGHIDVRPNYITRRYAEYSAAILGINQSYPDERADRILGQLQTEVEN
FILKLAAEFPHRKEQLIFLINNYDMMLGVITERTTEDSKESESFKELLTARTHEFIEEVL
TPHFGGMIMFVKDLEGHIERGNMEALRNEEQRVTQLVRGFNSDWKRALEYINQEVMRSFT
NFKNGTQILQGALTQLIQYYHRFQKVLNQGPLRNLQIRNELINIHHVMVEVKKYKPTF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggcttctgaagtaaagaattttcaagccgggatacagcctaacaaaatggag
ccggacagctgtcatcgaaccagagaggttgaagggatagctctcaatctaggagaactt
gatttaacatcagatgacttcctactagaagaggtggatgttcatattcaagaaaattta
gaagatgagtttgtaaaggaagcattaaagactggagttgatctacgacaatattctaaa
cagatagagtcagaattacttcaggtagaaaatgcttcgatacaggactatatcaaggag
agtgagaatattgccagcctccataaacagatagcagcttgtgataccatactagagagg
atggaggagatgttgaatggtttccagtctgatcttagcagtataagtactgagatacag
tcactacaagaacaaagtatagccatgaatgtcaagttgaagaatagacagtcaatacgt
ggggagctcagtcagtttgtagatgaaatggttataccagaatcaatgatcaatcatata
ttggacacaccagtgacagagagggagtttctagagcagttacacgagctcaatcataag
ataaactttgtgaaagaacaatcatttagggatgctaaatcatgtctagatgtgagagat
attctggaaaaacttaaaataaaggccattgctaaaattagagaattccttctaatgaag
attaattcattcaaaaaaccaatgactaactatcaaattcctcaggacaccatgttgaaa
tttaggttcttcaatgagtttttgatgacaaatgagaggcatgttgctaaggaagttcga
gatgaatacatggatacgatgagtaaaatctatttctcctattacaagggctatcttagc
aggttaatgaaactgcaatttgaggaaggggcaacaaaagatgatctgatggcagtggac
gagactgcaaagaaaggttttttcactagtaagagcacattaaagaacagatcaacagtg
tttacagtaggtaaccgtggtgacgttctgacgaccgagttagaagctccaatcattgta
cctcatgctgcacaaaaatctgaaaacaggtacacatttgagagtttattccgcagtcta
cattttgcactgatggataatgcctgtagggagtacttgttcctcactgatttctttatg
gcgtcgggaacttctgcgatagatttgtttaatacggtgtttggtaaaacactctcaata
tatctgaaatccatggaagagcatataaatgaatgttatgattccatcgccatatttctg
tcaattcatatagtacaccggttccgttctatcatggaaaacagaggggtaccagcactt
gaaagatactgggatagtgtgttacatgtaatgtggcctcgttttgaatatattcttgtc
ctcaatattcagagtgtcagagactgtgatcccgaaaagttaggccatattgatgtcaga
cctaattacataacaagacgatatgcagaatactcagcggcaatccttggtatcaaccag
tcctacccggatgaaagagcagacagaattctaggacagctacagaccgaagtagaaaat
tttatcttaaaactggcggcagagttcccacacagaaaagaacagcttatcttcctgatc
aacaactatgacatgatgttgggcgttattacagaaaggacaacggaagattcaaaggag
tctgagagttttaaagaattgctgacagcacgtacacacgagtttattgaggaggttctt
acgccacattttggcggaatgatcatgtttgttaaagatcttgaaggtcacatagagcgt
ggaaatatggaggctctacgtaatgaagaacaaagggttacacagcttgtgagaggtttt
aacagtgactggaagcgtgcactagaatatataaaccaagaggtgatgagatcttttacc
aactttaaaaatggaacacaaatattacagggagctttaacacagttgatacagtactac
catagattccagaaagtattgaaccagggaccactacgtaatctacagatacgaaatgaa
ctcatcaatattcatcatgtgatggttgaagtgaagaaatataaacctacgttctga
DBGET
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