Ruditapes philippinarum (Manila clam): 132745940
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Entry
132745940 CDS
T09557
Name
(RefSeq) non-homologous end-joining factor 1-like
KO
K10980
non-homologous end-joining factor 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
132745940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132745940
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
132745940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
132745940
NCBI-ProteinID:
XP_060590941
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MTTEVEWRRRWKPDLDAFPWQPIRVDGNTYLLKYMFTTDSYKVLLTDLTNFWHEELEDQS
LQKRIKKLNPGIEAPVTRILDQIKSVLDKTQDDPNTSIKLSFKREADSDERKVMLVLHSE
LAGMPFLWNFQCKPADKSMGTEHLILPLMAMVGELTRRQQELVKIIQAKDKQIDDYKSQG
AKCSRKHIETPNFVETAFEMNMMTSKGFVEQMKDIELKTFDIKSQDLYRQIMSKRAWVNK
SPTKATSEDESLLDDMSSADDNRRTSTGQSWGNSRLPPSLQQSKSPTKSPKKTPSPSKSS
NNSTPEASPVKDTELLRRQALERKLELEESKKKEKSKKKKKIGF
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagaagttgaatggagaaggagatggaaaccagatttagatgcatttccatgg
caaccaattagagttgatggcaacacttatcttttgaaatatatgttcacaaccgacagt
tataaagtgttgttaactgacttgacaaatttttggcatgaagagttagaagaccagagt
ttacaaaaaagaataaagaaattgaatccagggattgaagcaccagtaacaagaattttg
gaccaaattaaaagtgtacttgataaaacccaggatgatccaaatacctctataaagctg
tcattcaagcgtgaagctgattctgatgaaaggaaggtgatgcttgttttacactcggaa
ctcgctggaatgccatttctgtggaacttccaatgtaaaccagctgataaatctatgggc
acagaacatttgatactacctctcatggcaatggttggtgaacttactcgcaggcagcaa
gaacttgtcaagatcattcaggcaaaagataagcaaattgatgattataagtcacaaggg
gccaaatgttcaagaaagcatatcgagacaccaaactttgtggagactgcatttgagatg
aacatgatgacctcaaagggatttgtggagcagatgaaggacatagagttgaaaacgttt
gacatcaaatctcaggatctttacaggcagattatgagcaagagggcatgggtgaacaaa
tctccaacaaaagcaacatcagaagatgaaagtctgctagatgacatgagtagtgctgat
gataaccgcaggacatctacaggtcaatcctggggcaactcacgtcttccaccgtccctt
cagcaatcaaagtcgcccacaaaatcaccgaagaaaacaccaagtccatcgaaatcatca
aacaactctacaccagaggcctctcctgtaaaggacacagaattgttaagacggcaggca
ctagaaaggaagttagaattagaagaaagtaaaaagaaggaaaaatcgaagaaaaagaaa
aaaattggattttag
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integrated database retrieval system
