Ruditapes philippinarum (Manila clam): 132745951
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Entry
132745951 CDS
T09557
Name
(RefSeq) F-box/LRR-repeat protein 2-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132745951
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132745951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_EndoS
LRR_At1g61320_AtMIF1
F-box_4
Motif
Other DBs
NCBI-GeneID:
132745951
NCBI-ProteinID:
XP_060590960
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MLQCVSIMSVQIMSGCCCNHVFRTNWPLVHWGESPYRQVSQISITDDDAQINRKLPKELL
LRIFSFLDVVTLCRCAQVSKYWNLLALDGSNWQRVDLFDFQVDVKAPVVENISKRCGGFL
KALSLKGCQNITDDALQKFADQCKNIEELNLNNCKKLTDLTCESLGRHSKKLQHLDLSSC
LCVTDKALKFISDGCHHLRHINVSWCKDVTNDGLEALARGCLKLEDFICKGCNQITDVGV
GHIAIHCKNIRRINLHSCQSITDDALQLIGEHCRDLIFLCVSNCQRLSDNALVSVANGCP
ALSTLEVACCSHFTDNGFQALAKNCQTLERMDLEECIQITDSTLNYLGSYCHRLTALSLS
HCELITDEGIRHLGSSPCATEQLQVLELDNCPLITDASLEHLMGCQSLERIELYDCQLIT
RQGIRRLKTRLPNIKVHAYFAPVTPPASVGGGRQRYCKCCVIL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttacaatgtgtaagcatcatgtcagtgcagattatgtcaggatgctgctgtaaccat
gtgttcagaacaaactggccacttgtacactggggagagtccccctatagacaggtttca
caaatctctattactgatgatgatgctcaaatcaacaggaagttaccaaaagaattactt
ctgagaatattctcatttcttgatgtggtgacactgtgtcgatgtgctcaagtttccaag
tactggaacctccttgccctagatggtagcaactggcagagagttgacctctttgatttc
caggttgatgtcaaggctcctgtggtagagaacatctccaagagatgtggtggttttctc
aaggctctaagtctgaaaggctgtcagaatataacagatgatgctttacagaaatttgct
gatcaatgcaaaaatatagaggaattgaatctgaataactgtaaaaagcttacagatcta
acatgtgaaagtttaggtagacatagtaaaaagcttcagcacctagatctgagctcatgt
ctatgtgttacagataaagctctaaaatttatcagtgatgggtgtcatcatttacgacat
atcaatgtatcctggtgtaaagacgtgactaacgatggtctagaagcgctggcgcgaggc
tgtctcaaactcgaagattttatctgtaaaggatgtaatcagataacagatgtaggtgtg
ggccacatagcaatacattgtaaaaacataagacgaataaacttgcactcttgtcagagt
ataacagatgatgcattacaattgataggggaacattgtcgtgatcttatattcttatgt
gtatcaaattgtcaacgcctgtccgacaatgcactggtatcggtcgccaatggatgtcct
gccttaagcactctggaagttgcctgctgttcacatttcacagacaatggattccaagcc
ttagcaaagaattgccagactttagaacgtatggatttagaagaatgtatacagattact
gattcaacattaaattatctgggaagttattgtcacagactaacagcacttagtttgtcc
cactgtgaattaattacggatgaaggtataagacatttaggctcgagcccgtgtgccact
gaacaattacaagtgttagaactggataattgtccgttaatcaccgatgcctcactagaa
cacttgatgggctgtcagagtctagaacgtatagaactctacgattgtcagcttataacc
agacagggaatacgaagattaaagaccagactaccaaacatcaaagttcacgcctacttt
gccccagtaactccgcctgcatcagtgggcgggggcagacagaggtactgtaaatgctgt
gttatactttga
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