Ruditapes philippinarum (Manila clam): 132746069
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Entry
132746069 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132746069
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rphi01009
]
132746069
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rphi04515
]
132746069
Protein phosphatases and associated proteins [BR:
rphi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132746069
Cell adhesion molecules [BR:
rphi04515
]
Cadherins
Protocadherins
132746069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Sde0182_C
Cadherin_CELSR2_9th
Cadherin_pro
TMEM154
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
132746069
NCBI-ProteinID:
XP_060591124
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MDDCKVKGFLLTVTILISVSSVFSETFTFRMKEEEKIGYVVGNILEQYKSDRDELRFTLM
KQGNEYESLFEVEEISGNLTTKQIIDREVLCEFTTTCEISLDVAAQTVLNDGFFDVVNII
VIVEDINDNAPTFNKSSLNLPLSESVLTGSSITIEGARDKDTSEQFSLKSYDLQPKMTGE
ALPFNLTFSKKLDGSSKINLIVKEKLDREVKDSYQFYIIAKDGGPTPKIGTLLVNVSVLD
INDNSPVFEKSSYDITVNEDVNVNDVILTLKVTDDDLGDNGKVRFKLSSFQPKNNLKYFS
IDERLGHLKIKEKLDSDAGNTFRLIVEATDQGNPPLTTQTFVDVSVLDTSNSAPEIHLNL
LSNANYSRVSEYANIGAVVAHVAIVDRDSGRNGNVNCSVISDVFGLQRYDVHEYKVIVSR
SLDRERSASHNVSIRCEDKGVPPLGNTKSFLVHINDENDNPPRFRQQRYFTNIDENNEIG
DEIITVKAFDLDFGNNSDITYFMATTSSKYAYVDSKTGMVMANKVFDKESKEGQGVSLTI
YAKDNGVPALTGTTSVIVTINDQNDEKPVFDQTLFRFWLDENLPADTSVDRLSAKDNDKS
SNAITKFSLKPGQPEVPFVVLEDGVIKTDRELDREVKDEYTFEVVATDASKRLFSTAKVT
VFIVDKNDNDPVIQYPKPGNNTVNVSFLTSPRTIVYNVIAYDLDEPYTDNSNLRYSMTTE
NKTNFFSIDPLSGDVILSAPLENTNYVGKMYLLKITVRDSGDGTKPATAMLRIFITTDNE
TLSSSTEEPNKNFVIVVVVAALTILISAGIIVTICIIRRLDSRRRDDKQRQKVLNDNMYT
KNNEEVDNIFPLPMDTSFTEKKKKEVSFSLEENGMMNHSQMNCALDEPGQDSFEILLEPP
PQYQLCVPKGKLDDCHSDMSGESNGDSGKGGSDDDLQIPSGLGFIRDDIQRSRDRWESSR
SESPSMQQMTTFPSRCLQNDTIPHQKIIPFSFKKTPSYMGSGLVANNLTPSTPSSSYSMP
MYYDDESRSSSGFQSADSSYSNRHRNGGKLNLMRNNIQDCVV
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggatgattgcaaagtaaaaggatttttattgactgtaacgatattaatatctgtttct
agtgttttttctgaaacgtttacatttcgaatgaaagaggaggaaaagatcggatacgtt
gtgggtaatatacttgaacaatacaagagtgaccgggatgaacttcggttcacgttaatg
aaacaaggtaacgagtacgagtctctgtttgaagtggaagaaataagtggtaatttaaca
actaaacaaatcattgacagggaagttctgtgtgaatttaccaccacgtgcgaaatatca
ctcgacgtggccgctcaaactgttttaaatgacggctttttcgatgttgtcaatatcata
gtgattgtagaagacataaatgacaatgctccaactttcaataaatccagtctaaactta
cctctatcggaatcagtcctaaccggaagtagtattactatagaaggtgcccgtgacaaa
gacacaagtgagcagttttcgttaaaaagttacgatctgcaacccaaaatgacgggagag
gcgttacccttcaacttaacattttcgaaaaagttagacggcagttccaaaataaatctc
attgtaaaggagaaattagacagggaagttaaagattcttatcaattctatatcatagca
aaggatgggggaccaacgcctaaaattggtacattattggtgaatgtttcggtattggat
attaatgataacagtcctgtgtttgaaaaatcttcctatgacatcactgttaacgaagac
gttaacgttaatgacgtcatactcacgttaaaagtgactgatgacgatctcggcgacaat
gggaaagtcaggtttaaactaagctcatttcaaccaaaaaacaatttaaagtattttagt
atagacgaaaggctaggtcacttaaagattaaagaaaaattagactcggacgctggtaat
actttcaggctgattgtggaagcgacggatcaggggaacccccctctaactactcagaca
tttgtagatgtttctgttttagatacgtcaaatagtgcaccggaaattcatctcaatctc
ctctcaaatgccaactactccagggtttcagagtatgccaatatcggcgctgttgtagct
cacgtggcgatagtggaccgcgactctggtcgtaatggtaatgtgaattgttccgtgatt
agtgacgttttcggcctacaacgatatgacgtgcacgagtacaaagtgatagtgtcaagg
tcattggatcgtgagcgatcagcttctcacaacgttagtatccgatgcgaagataaaggt
gtacctcccctaggtaatacaaaaagcttcctagtgcatataaacgacgagaatgacaat
ccgcccagatttagacagcagcggtacttcacaaatattgacgaaaataatgaaatcggt
gatgaaattataacagttaaagcattcgatcttgacttcggcaataatagcgatataact
tactttatggcaactacttcttctaaatatgcatatgtcgactcgaagactggtatggtc
atggcaaataaagtctttgacaaggaatctaaagaaggtcaaggggtctcactaacaatc
tatgcgaaggataatggtgtgccagcgctaacaggaactacatctgtgattgttactatc
aatgaccaaaacgacgagaaacctgtattcgaccaaaccttattccgtttctggttagac
gaaaatctccccgcagatacgtccgtggaccgactaagtgcaaaggataatgacaaaagc
agtaatgcaataacaaagttttcgttgaaaccaggtcaacctgaggttccattcgttgtt
ctggaagacggggtaatcaaaacagatagagaattggatagagaagtaaaagacgaatat
acatttgaagttgtcgctacagacgccagtaagcggcttttcagtacagctaaagtaact
gtgtttattgtagacaaaaacgacaacgaccctgtcattcaatatcctaaacccggtaat
aataccgtaaacgtttcattccttacgtcaccaagaacaatcgtatataacgtcattgca
tacgacttagacgagccatacacggataactcgaacttacggtactctatgactacggag
aacaaaacaaacttcttttccatagatccacttagcggtgatgttattttatcagctcct
ttagaaaacactaattacgtcggtaaaatgtatttactgaaaataacagttcgggatagc
ggggatggcaccaagccggcgacggccatgttacgtatattcataacaacagataacgaa
accttatcttcatctaccgaagaaccgaataaaaactttgttatagttgttgttgttgct
gccttaacgattctaatatctgccgggatcatagttaccatatgtattatccgtcggctc
gattcccgccgtcgggacgacaaacaacgacaaaaggtgctgaacgataacatgtatacg
aagaacaatgaagaagtggacaatattttccctctccctatggatacaagcttcacagag
aagaagaaaaaagaagtgagtttttcactagaggagaatggtatgatgaaccacagccag
atgaactgtgcacttgatgaacccggccaagacagtttcgagatactattagagcccccg
cctcaatatcagctatgtgttccaaaaggtaaattggacgattgtcattcggacatgtca
ggagagagtaacggagacagtggtaaaggtggtagtgacgatgaccttcagataccgtct
ggtttaggttttattagagatgatatacaacgctcaagggacagatgggaaagctcaaga
agtgaaagtcccagcatgcaacagatgacgacatttccgtcaagatgtctgcagaacgac
acaattccacaccagaaaatcattccattctcctttaaaaagacgccatcttatatgggg
tctggactagttgcgaacaacttaacaccgtcgacgccgtcgtcatcttacagtatgccg
atgtattatgacgacgaaagtcgctcctcgtcgggattccaaagtgcagattctagttat
tcaaacagacacagaaatggcgggaaattgaatttaatgagaaacaatattcaagactgt
gtcgtctga
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