Ruditapes philippinarum (Manila clam): 132746271
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Entry
132746271 CDS
T09557
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132746271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132746271
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
132746271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
SWI2_SNF2
AAA_34
Motif
Other DBs
NCBI-GeneID:
132746271
NCBI-ProteinID:
XP_060591362
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MRRSAAPSQAGRPKFVSPILLSKSTTTTVINKQAPTCTNTSVPEACQKSNILKRIFPESC
NNGQCDEETSSDDKDDSKQADGDSEENFVSQVAKKPRFQAPSFNTPTISSSPVTKLKTNN
ENIGEEDKGIASGYFSVVWCKRSNKKHKKWEGDAVLVTRGRSVTLYDIEGKEIGKGSGYK
SAELASLKEDETLPIGGKEIQVMSLLTEDLFKSGKCFTGNTVTSSAPLPKVPVKNVSKPF
SKPLKAGCIDSTVSKPEPVVVKPRYDPTIPGALVMPAPSDSHQWQWNKRSLPVVDVVIDP
YLSSNLRPHQREGVTFLYECVMGYRNYSGQGAILADDMGLGKTLQCISLIWTLYKQGPYG
GKPVAKRILVITPGSLVKNWHQEFKKWLGFERLQVYAVSSDKKVEDFMKTSLYPVLIISY
EMFVRMFETLQQLTFDLIVCDEGHRLKNTNIKTTSLIMSLPTQRRVVLTGTPIQNDLQEF
FSIVEFCNPGVLGTSAGFRRVYEDPIVASRQPGATKEEISLGEERGVELSRMTQMFILRR
TQEINNKYLPPKRDIVLFCRPSALQLTLYQQLLRCQLIRSCLSGSMSGSPHLICIGALKQ
LCNHPSLVYKKSLEHEDNKNCEDYDENRSVYGGLHSLFPEGFCIDKGLEEHSGKLAVLSS
LLQHLNSVQSCKPEKIVVVSNHTKTLDLIQCLCDQIQYKYLRLDGQTPTSKRQELVQRFN
SKHSPEFIFLLSSKAGGVGLNLVGASRLVLYDIDWNPANDLQAMARVWRDGQKNVVHIYR
LLTTGSIEEKIYQRQISKQGLSGAVMDVREKNTAVQFSLEDLRDLFSVNMSTDCDTHDLL
NCDCGARNTVQPVQQNIHTATNRPCQLGVKAMPKRQNLGMDELMEWKHLPSSVINKHPTW
YLQDTIQNVSFVFYNEINGNTKQDSNISGVT
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagaagatcagctgcaccaagtcaagcaggtcggccgaagtttgtatctcctattctt
ttatcaaaatcaacaactactactgtcataaataagcaggcacctacttgtacaaataca
agtgtccctgaggcatgtcagaaaagcaatatattgaagaggatatttcctgaatcatgt
aataatggacaatgtgatgaagagacatcatcagatgataaggatgatagtaaacaggca
gatggtgatagtgaagaaaactttgtttctcaagtggcaaagaaaccaagatttcaggct
ccatcatttaatacacctacaatctcttcatctccagtcaccaaattaaaaacaaataat
gaaaacataggtgaagaggataaaggtattgctagtggttattttagtgttgtctggtgc
aagaggtccaataaaaagcataagaaatgggaaggagatgctgtacttgtaacaagaggt
agaagtgttacattgtatgatatagagggaaaagagattggtaaaggttctggttacaag
tcagcagagttggcttctctgaaggaagatgaaactctccctattggaggaaaagaaatt
caggtcatgtcattgttgacagaagacctattcaagtctggtaaatgtttcacaggaaac
acagtgacatctagtgctccattacctaaagtgccagtgaaaaatgtatcaaagccattc
agtaaaccattgaaggctggatgcatagacagtacagtatcaaaacctgagcctgtagtg
gtcaaacctcgatatgatccaactatacctggtgcccttgttatgccagcacccagtgat
agtcaccagtggcaatggaacaagagatcccttcctgtagtggatgttgtcattgatcct
tatctctcctccaatctcagacctcatcaaagagaaggggtcactttcttatatgagtgt
gtcatgggatatagaaattacagtgggcagggggcaattcttgcagatgacatggggctt
gggaaaacattgcagtgtatttctttaatatggacactgtacaaacagggaccatatgga
ggaaagcctgtagctaaaagaatactcgtaataacaccaggtagtctagtgaagaattgg
catcaggaatttaagaagtggcttggatttgaaaggttgcaagtttatgctgtaagctca
gacaagaaagttgaggattttatgaagacatctttatacccagtgttgattatctcatat
gagatgtttgtgagaatgtttgagaccttacaacagctaacatttgaccttattgtttgt
gatgaaggtcataggctgaagaataccaacattaaaactacatctttgataatgagttta
cctacacagagaagagttgtattgactggtacaccaatacagaatgatttacaagaattc
ttttctatagtagaattttgtaatccaggagtgctaggcactagcgctggttttagaaga
gtgtacgaggatccaattgtagcatctcgtcaaccaggtgctactaaggaagagatttca
ttgggtgaagaaagaggagtggagcttagcagaatgactcagatgtttatattgagaagg
acgcaggaaatcaacaacaaatatctcccacctaaacgagacatagtgttattttgccga
ccatctgccctgcaacttaccttgtatcaacaattgttacgctgtcaactgatccggtct
tgtttgtctggtagtatgtctggttcaccacacctaatttgtattggagctttaaaacag
ctgtgtaaccatccttctcttgtatacaagaaatcattggagcatgaagacaacaaaaac
tgtgaagattatgatgaaaataggtcagtatatggaggtttacacagcttattccctgag
ggattctgtatagataaaggtctggaggaacattctggcaagttggctgtattgagctcc
ttattacaacatcttaactcagtacagtcttgtaaaccagagaaaattgttgttgtatcc
aatcatacaaagacattagacttaattcagtgtttatgtgatcagatacagtataaatat
ttaagacttgatggacagactccaaccagtaaaagacaggaacttgttcagagatttaat
agtaaacattctccagaatttattttcttgttgagttctaaggctggaggcgtaggtttg
aatcttgttggggcatcacgattggttctctatgatatagactggaacccagctaatgat
ttacaggcaatggctagagtatggagggatggacagaaaaatgttgttcatatatatagg
ttattgaccacaggaagtatagaggagaagatatatcagagacagattagtaaacaagga
ttgagtggagcagtgatggatgtcagggagaaaaatactgctgtacaattctcattggaa
gatctcagggatttattttctgtaaacatgtcaacagactgtgatacacatgatctactc
aactgtgattgtggtgctagaaatactgttcaaccagtccagcaaaatattcacacagcc
actaacagaccatgtcaactaggggtcaaagctatgcctaagagacagaatttaggcatg
gatgagttgatggaatggaaacacttgcccagttctgtcataaacaaacatcccacatgg
tatttacaagatacaatacaaaatgtttcatttgtattctacaatgaaatcaatggaaat
acaaaacaggacagtaacatcagtggagtaacttga
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