Ruditapes philippinarum (Manila clam): 132746339
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Entry
132746339 CDS
T09557
Name
(RefSeq) ankyrin repeat and SAM domain-containing protein 4B-like
KO
K21878
Usher syndrome type-1G protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
132746339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rphi03037
]
132746339
Cilium and associated proteins [BR:
rphi03037
]
Primary cilia and associated proteins
USH complex and associated proteins
132746339
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
SAM_1
SAM_2
SAM_7
DUF4407
SAM_Ribosomal_mS41
Motif
Other DBs
NCBI-GeneID:
132746339
NCBI-ProteinID:
XP_060591433
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MTDKFHRAARDGYLDILREANKREMNYPDEDGCTPPMLAAQYGNLEALRTTITRGGDVNK
MDLLGFTAMHHAARHGHWNCVSFLISFGANIWIMDNELHTALDIAALENREDIVKLLDAA
QNEQVRKNPKVIQKLKEKAMKDSDNNLKQYQRLQDKAAKDLAKEKRQMEREESIQNGNDF
KAPSKKNFVKTLTQRIKGNTAKSKATRGRAEAFSAFANGGTTRGASSRSRISDGNNEFNI
SEVDDTGRRTLRSIRGTASRKDGQVLYVKNIDIDGSDEKTIDNSARGAITNIFPDAAIGG
DARDSGVDESFEDDESAPGIFNRPSFGNICFLGSHFQHTNSFQNQANVSLDETDAGYQNG
DLSNGLDGNNTDGKRLSSGTESYIEADKDLPWKAEDVEELDDDEDDDSEYTPVIMFLEGC
GLRLYTHLFLDSDVDMDALMMLTNQDFQDMGLPIGPRRKLMDAIQRRRVVLTEPAQMYDS
QL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaagtttcatcgtgcggctcgggacggctaccttgacattctgagggaggct
aacaagagggaaatgaattacccggatgaggacggatgtacgccccctatgttagcagct
caatacggtaacctcgaggctttgaggacaacaatcacccgaggtggtgacgtcaataaa
atggatttacttggtttcacggcaatgcatcatgcagctagacacggtcactggaactgt
gtgtcattcctcattagttttggcgccaatatttggattatggataacgaactacatacg
gctctcgatattgcggctcttgagaacagggaagatattgtgaaactacttgatgctgcc
cagaacgaacaagtcaggaaaaacccaaaagttatccaaaaattgaaagaaaaggcgatg
aaagactcggataataatttgaagcaatatcaaagactgcaagataaagcagcaaaagac
ttggcaaaagaaaaaagacaaatggaaagagaagaaagcattcagaacggaaatgatttc
aaagcaccgagtaagaaaaatttcgtaaaaacacttacacagagaataaagggaaatacg
gcaaagtcaaaggcgactcgtggtagagctgaagctttttcggcctttgcaaacggtgga
acaacccgaggcgcctcatctcgttcacgtatatcagacgggaacaatgaattcaatatc
agtgaagtagatgatactggtaggagaactttgagatcaattcgtggaactgcctccaga
aaagatggacaggtattatatgttaaaaacatcgacatagatggttcagatgaaaagaca
atcgataatagcgcacgtggtgctattacaaacatatttccagatgcagctataggtggc
gatgctagagattcgggtgttgacgaaagttttgaagatgacgaaagtgcccctggaatt
tttaatcgtccaagttttggaaacatatgttttcttggcagccacttccaacacacgaac
agttttcaaaatcaagctaatgtttcgttagatgaaacagatgctggatatcaaaacggg
gatctttcaaatggtttagatggcaacaatactgatggtaaaagattaagtagtgggaca
gaatcatatattgaagctgataaagatttgccatggaaagcagaagatgtggaagagcta
gatgatgatgaagatgatgattctgaatatacaccagtcatcatgttcttggaaggatgc
ggactaagactatacacacatttgtttctagattccgacgtagatatggatgctttaatg
atgttaacaaaccaagactttcaggacatgggtttacctattggaccaagaagaaaacta
atggatgctattcagagaagacgagttgtgcttaccgaacctgctcaaatgtatgacagt
caattataa
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