Ruditapes philippinarum (Manila clam): 132746972
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Entry
132746972 CDS
T09557
Name
(RefSeq) F-box/LRR-repeat protein 16-like
KO
K10282
F-box and leucine-rich repeat protein 16
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132746972
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
132746972
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_8
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
132746972
NCBI-ProteinID:
XP_060592246
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MSTIRKAYMEISNGIRGLRLHREQPQPAQATTSKEIVSKQTTNGTTVSSAQGGRMVRSPK
PLIARKIRSLFGRTQPTSVRDLFLDERFLSKFFMFFSAEERGKLSQVCRAWKNILYQPKF
WINVIPIIACRELSKRDETRRSFYESLQQRSFDAVCLFGATDEDIADFVNHFSNCKKQIR
SISLRCSNVTDSGLEVLFKRLSGIYRLEISGCNELTETGLWSCLNPKIVSLSVSDCINVA
DDTVGAVSQLLPSLYEFNLQAYHVTDAALAFFSAKQSYTLCILRLQSCWEITNHGVVNIV
HSLPNLTILSLSGCSKITDDGVELIAENLRKLRVLDLSWCPRVTDAALEYIACDLNQLEE
LVLDRCSHVTDIGVGYLSTMTSLLKLFLRWCTQIRDFGLQHMYSMRSLRVLSLAGCSLIS
GQGLCGLTQLRFLEELELTNCPSATKEVCLYLKENMPRCMILE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccattaggaaggcctatatggaaatatcaaatggcattcgtggattgagattg
catcgagaacaaccacagccagctcaggcgacaacttcaaaagaaattgtgagtaaacag
acgacaaacgggaccacggtatcgtcagctcaaggtggcaggatggtgcggtcaccgaaa
cctctgatcgctaggaaaatacgtagtttgtttggtcggactcaaccgacttctgtgagg
gatttattcctggatgaaagatttctgtcaaagttttttatgttcttctcagcagaagaa
agaggaaaattatctcaagtgtgtagagcatggaaaaatattctttatcagccaaaattc
tggataaatgtgattcctataattgcatgtagggagttaagtaaaagagatgaaacgcgg
cgttctttttatgaaagcttgcaacaacgaagttttgatgccgtctgcctttttggcgcc
actgacgaggatatagcagattttgtaaaccatttctcaaactgtaaaaagcagattcgc
tctataagtctcaggtgttcaaatgtgaccgattcagggttagaagttctgtttaaaagg
ctttctggaatttatcgtctggaaatttcgggatgcaatgagttaacagaaactggcctt
tggtcatgtttgaatccaaaaatagtatctttgagtgtcagtgattgcataaatgttgca
gacgatactgtcggcgccgtgtcccagcttttaccctcattgtacgagtttaatcttcaa
gcctaccacgtgactgatgcagctctagcgttctttagcgctaaacaaagctacacatta
tgtattttgcgtttacaatcttgttgggaaattacaaatcatggcgtggtgaatatcgtt
cattcattaccaaatttgaccattttaagtttgtcaggatgtagcaagattaccgacgat
ggtgttgaacttatcgcggaaaatcttcgaaaactgcgtgtccttgacctctcgtggtgt
ccacgtgtaacggacgctgcgttggaatacattgcttgtgatctgaaccaattagaagaa
ctagttcttgacaggtgctcacacgtgacagacatcggtgttggctatctatctacgatg
acgtcattattaaaactatttttgcgatggtgtacacaaatacgtgactttggtctccag
catatgtactctatgcgtagtctacgggttctttctttagctggttgttcactcatatca
ggccagggactttgtggtctcacacagctgcggttcttggaggagctcgaacttacaaat
tgccctagtgccacaaaggaagtgtgtctctacttaaaagaaaacatgccacgttgtatg
attcttgaatga
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