Ruditapes philippinarum (Manila clam): 132747109
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Entry
132747109 CDS
T09557
Name
(RefSeq) xylosyltransferase oxt-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rphi00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
rphi01100
Metabolic pathways
Module
rphi_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
132747109
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
132747109
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rphi01003
]
132747109
Enzymes [BR:
rphi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
132747109
Glycosyltransferases [BR:
rphi01003
]
O-Glycan biosynthesis
Glycosaminoglycan
132747109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Branch
Xylo_C
WSC
Motif
Other DBs
NCBI-GeneID:
132747109
NCBI-ProteinID:
XP_060592407
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MMCGKYIAQINMAAPRTNSSWRICRRYRVFFYFCFIALSIQLFLGYSFYSLNQQEINKLH
QWKSDVEKMLKTPVPNFTASSNDHPKSLKNQPSETERNHARFHGQPFVKTTLRTSYKLVK
TIYKTDSKKLNCSKVSTKEASSALSRVKTDSCKKEILDVVCRNEHHMLYPSSLPRTCHLK
GKEPRGKYFGCFKDNQKERDLTNFNVIFAVDNCPNKCIDFCLTGSYMYAGVQYRDECWCG
NSYGKYGSLPETSCSTICPGNSSDTCGGYNAQRIFSTGLPEKKTIKAELVYTANSVKDLT
PVRIVFVLTVNGRAVRQVRRLINILFDPNHYFYIHVDSRSEYMYRELLPLEKKLLNVRFS
RKRFATIWGGASLLQAHLTFMESLLEMADWHWDYYINLSESDYPVKTVASLTTFLTRYRG
NNFLKSNGRETPTFIKKQGLNWLFHECDNHLWRLGKCELPRGISYDGGSDWIGLYRDFIE
YSVRSNDELNTGLKKFYKYTLLPVESFFHVLLLNSEFCESWVDNNLHLTNWKRKQGCKCQ
HKNQVDWCGCSPNVFKIEDHDRLQTYKGKVAFFARKFEPVINQEIINDVDTMMGRDLIDL
PGLNRHWHNDYHFKDSFDKRTDLWLTFAKSFVRHNQEVLGSATSNCIMSNVRILESHVLN
LADSFHRYVIKYNVSLPGRSVPVTLESQFSYKQHYNIIDPLGPIGRLQNLEVGTDFDLKE
LVFRNYPKFLGPNSEVALRHVWGYGTETTFSVAWIDPAGIVAAYQDVTVTKETHIDAHKP
KLKTPLRPGVWTVKVLYKLKICAEIQFIILPLSTHNNVPLTLDDVISLHNGPSGLYSRAD
YSDFTEKLGIKNPTKLLQESVINGHKFGPDLDAWIDELTAFSWSVQDTCTVSDLDQSCPP
LDLCSSTRWSSMSPDPKSEISQIMLSNLQI
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcggaaaatatattgcacaaataaacatggcggcccccaggacaaattcgtcc
tggaggatttgccggcgatatagagtctttttctatttttgttttatagctttgtcaatt
cagttatttctaggatatagcttctattctttaaatcaacaagaaattaacaaacttcat
cagtggaagtcggatgtggaaaaaatgttgaaaacaccagttccaaattttacggcatct
tcgaatgatcaccccaaatcacttaaaaatcaaccgtctgagactgaaagaaatcacgca
aggttccatggtcaaccatttgtcaaaactactctgagaactagttacaagctggtaaag
acgatttataagactgatagtaaaaagctgaactgtagtaaggtgtcaacaaaggaggca
agctcggcactgtcacgtgtcaaaacagactcgtgtaaaaaagaaatacttgatgtagta
tgtagaaatgagcaccatatgctgtacccctcttcccttcctagaacatgtcacctcaaa
ggtaaagagccacgtggtaaatactttgggtgttttaaagacaatcagaaggagagagat
ttgacaaacttcaatgtcatatttgcagtggataattgtccaaacaagtgtatagatttc
tgcctcactgggagttatatgtatgctggtgtacagtacagggatgaatgctggtgtggt
aacagttatggcaagtatggatctctacctgagacctcatgcagcactatttgtcctggt
aactcttcagatacatgtggtggttacaatgctcagagaattttcagtacaggtttacca
gagaagaaaaccatcaaagccgagttggtatataccgctaattctgtaaaagatctgaca
ccagtaagaatagtttttgtgctaacagtgaatggtcgtgccgttaggcaggttcgcagg
ttgataaatatattgtttgatccaaaccattatttctacatccatgttgacagtagatca
gagtacatgtaccgtgagttgttgcctctggaaaagaagttgttgaatgtgaggttttct
agaaaaaggtttgctactatttggggtggagcaagtctgctgcaagcacatttaactttc
atggagagccttcttgaaatggcagactggcactgggattattacattaaccttagtgaa
agtgattatccagtgaaaactgttgcatcactgacaacttttctaacaagatatagagga
aataatttcttgaagtccaatggaagagaaacaccaacatttatcaagaagcagggattg
aactggttatttcatgaatgtgataaccatttatggagattgggtaaatgtgagttacca
aggggtataagttatgatggtggtagtgactggattggactttatcgtgactttatagaa
tattctgtaaggtcaaatgatgagctgaatactggcttgaagaagttttacaagtatacc
ttactgccagtagagtcatttttccatgtgttactgctgaacagtgaattctgtgaatct
tgggtggacaataatcttcacttgaccaactggaaacgtaaacagggttgtaaatgtcaa
cataaaaaccaggtagattggtgtggctgttctccaaatgtcttcaaaatagaagatcat
gacaggcttcagacatacaaagggaaagtggcattctttgctaggaagtttgaaccagtg
ataaaccaggaaattataaatgatgtggacactatgatggggcgtgacctgatagattta
ccaggccttaaccgtcactggcataatgattaccatttcaaagattcatttgacaagaga
actgatctgtggttgacctttgcaaagtcatttgtgagacacaatcaagaagttttagga
tcagccacttcaaattgtatcatgtctaatgttcgcatcttagaatctcatgtgctgaat
ttagcagatagctttcatagatatgtgatcaagtacaatgtgtcattaccagggagaagt
gttccagtgacattagagagtcagtttagttacaaacagcattataacatcatagatcct
ttaggaccaatcggacgactacaaaatctagaggttggtacagattttgatctgaaagag
cttgtgtttagaaattacccaaaattccttggtcctaacagtgaggtagcattacgtcat
gtttggggctatggtactgaaaccaccttctctgtggcgtggatagatcctgcagggatt
gtagcagcctatcaggatgtcacagtgactaaagaaactcatatagatgcccataagcct
aagcttaaaactccactgagaccaggtgtttggactgttaaagtgttgtataaattgaaa
atttgtgcagaaattcagtttataattcttccattatctacgcataataatgtgccattg
acattagatgatgttatttcattacataatggcccttcagggttgtattctcgcgcagac
tatagtgattttacagaaaagcttggcataaaaaatcctacaaagttactccaagaatct
gtgataaatggacataaatttggtcctgatttggatgcctggattgatgagttgaccgca
ttttcatggtcagtccaggacacgtgtacagtttctgacctagatcagagttgtccaccc
cttgatctctgttcttccactagatggagctccatgtcaccagatccaaagtcagaaata
tctcaaattatgttaagtaatttacagatttaa
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