Ruditapes philippinarum (Manila clam): 132747167
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Entry
132747167 CDS
T09557
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X1
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00512
Mucin type O-glycan biosynthesis
rphi00514
Other types of O-glycan biosynthesis
rphi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
132747167
00514 Other types of O-glycan biosynthesis
132747167
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rphi01003
]
132747167
Enzymes [BR:
rphi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
132747167
Glycosyltransferases [BR:
rphi01003
]
Glycan extension
Type 3 chain
132747167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
FAE1_CUT1_RppA
Motif
Other DBs
NCBI-GeneID:
132747167
NCBI-ProteinID:
XP_060592470
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MLRRAVSMQNATVNFVLGLSVGLVFAFLAVSYMSGSSGISIHTPRRIPVEEVSKFNNVPD
SVLTHEDLDKIQQIVRPVQFEDAHAHHDDDKEAVDLKNKIRVLCWVMTSPQNLQKKAIHV
RNTWAHRCNKLIFISSETNTSFPTVGIDVPEGRDHLTGKTMKAFRFIFENHFDEADWFMK
ADDDTYVILENLRYFLSSQNKDDPIYFGHHFKTIVKQGYFSGGAGYVLSKEAMRRFGARG
NDSKLCRQDGGAEDAEFGKCMQNLGVKVGNSTDKLGRSRFHCFDPETHLRGGYPDWYYKY
DAHGAKKGKESISDYAISFHYVPPAKMYGLEFYVYHLRPYGINSGHQDLNQDIS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaagggcagtttcaatgcagaatgcaacagtcaactttgtgttgggtttgtcg
gtcggcctcgtgtttgcattccttgcagtgtcttacatgtcagggtcgtccggcatttcc
atacacacaccacgtcgaataccggttgaagaagtcagcaaatttaacaacgtgccagat
tctgtcttgacacatgaagacctagataagattcaacaaatcgtgcgtccagtccagttc
gaagatgctcacgctcatcatgacgacgacaaagaagcggtggatttaaaaaacaaaatc
cgggtcctttgttgggtaatgaccagtccacaaaacttacagaagaaagctattcacgtc
aggaatacttgggctcatcggtgtaacaaacttattttcatcagttccgaaacaaacaca
agttttcccactgtaggtattgatgtcccagaaggaagagatcatttgactggtaaaacg
atgaaagcgtttagattcatttttgagaatcatttcgatgaggcagactggtttatgaaa
gcagacgatgatacctacgtcattttagaaaatttacgttacttcctttctagtcaaaat
aaagacgacccaatttattttggacatcattttaaaactattgtgaagcaaggttacttt
agtgggggtgcgggatatgttcttagcaaagaggcaatgcggcgatttggcgcgcgcggg
aacgattcaaaattatgtcgccaagatggcggcgcagaagatgctgaattcggcaaatgt
atgcaaaatttaggagtgaaagttgggaattccacagataaacttggaagaagtagattt
cattgttttgacccggaaacccatttacgaggagggtatcctgactggtactataaatat
gatgctcatggtgctaaaaaggggaaagaaagtataagcgattacgcaatctcatttcat
tatgttccgccagcaaaaatgtacggcctcgaattttatgtatatcatcttcgaccatac
ggaataaattccggacaccaggatttaaaccaggacatatcatag
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