Ruditapes philippinarum (Manila clam): 132747506
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Entry
132747506 CDS
T09557
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2-like
KO
K08533
RAR-related orphan receptor beta
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132747506
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rphi03310
]
132747506
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132747506
Nuclear receptors [BR:
rphi03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
132747506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
132747506
NCBI-ProteinID:
XP_060592888
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MHTDGSDVGETGFQLFRPFPAFNEDYTEEMPSTSLLSPLLLSSCTQINDDLNEWHDISST
TTIDNGAYSIPTYSPQVTLQADDDYVITSLDGYSVASNDNSGYTSSGISSPEALSSSYSP
TESPETVTDGISVTSRLKCVLMSRQKKQNNLSASVPNEHSTPSSAIHNYSSAERRVVDNK
FSDEAGKYEKCTSKTALRFPPCSVCGGTASGLHYGVNSCEPCKGFFTRYLRKKEVYKCAK
DNNCPITNRLRGNCSACRLKKCLALGMARKNSRLGRYSLSRRMETIMQVNELEKQNDDQV
NQTLMQDFNGKHMNEMPIIDTDIESRNSGKIQTDHQEQAEPVRNTHSASFKLKAPSGFSY
KLVKTLVEYMERIKPYGEDITSKEQIMQTLLSHYESYKLKIDIFGNLRSVPRDEYFNLLK
GFGIEIDKRMMFLKQSANEMMDIIERYCNFAKQIPNFTCLSNRDQTNLLKSSRYDFFMIL
MHDGYLHEKQVFLAHNGAAFHMEEVADKFFSRKLVINVCDMYHRLQKLKLSKEENALLIA
ISLVFTDRCSLENPSLVEQIQFSLTQLLQKQLQRTCPSSALRRFTKIIDCLTIMRESSEL
YLKEYSELCQDEMVIEEVPIMTELLFED
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcacacggacggaagtgatgttggagaaaccggattccaattgttcaggccctttccc
gctttcaatgaagattacacagaagaaatgccgtcaacatccctactttctccactgctg
ctgtcatcatgcacacaaataaatgacgacctcaatgaatggcatgatatatcaagtaca
actacaatagataatggcgcttattcaattccaacatattctccgcaggtcactctccag
gctgacgatgattatgtcattacatcattggacggatattctgttgcgtcaaacgacaat
tctggatatacaagtagtggcatttcttctccagaagctttatcttcctcctactctcca
actgagtcgccagaaacagtgacagatggtatatcagttacatcgcgactaaaatgcgtt
cttatgtcgcgccagaagaaacagaataatttatcagcgtccgtacccaacgaacattcc
acaccttcatcggcaattcataattattcatccgctgaaagaagagttgttgacaataag
ttttctgatgaagcaggtaaatatgagaaatgtacatcaaaaactgctctacgattcccc
ccttgcagtgtatgtggtggaacagcatcagggctacactacggcgttaatagttgtgag
ccatgtaagggattcttcacaagatacctacggaagaaagaggtttacaaatgtgcaaaa
gataataattgtccgataactaatcgtttgagggggaattgtagtgcgtgtcggttgaaa
aaatgcttagctcttggcatggcaaggaagaattcaagacttggtcggtatagtctttct
agacgaatggaaacaattatgcaagtaaatgaattagaaaaacaaaacgacgatcaagtt
aatcagacactcatgcaagattttaatggtaaacatatgaatgaaatgccaatcattgac
actgacattgaaagtagaaactcgggaaagattcaaactgatcaccaagaacaagcggaa
cctgtgaggaatactcattctgcttcatttaaattaaaagctccctctgggttttcatat
aaacttgtgaagactttggtagaatatatggaaagaattaaaccttacggcgaggacatt
acgtctaaagagcaaataatgcagacgctgctttcccattacgaatcatataagctgaaa
atagacatcttcggtaatctaagaagcgtgccaagagacgaatattttaatcttctaaaa
ggtttcggaatagaaattgacaaaagaatgatgttcctgaaacaatctgccaacgaaatg
atggatatcattgagcgatattgcaattttgcgaaacaaattccaaattttacatgtctg
tctaacagagatcaaactaacttgctgaaatcgtcgcgttacgatttcttcatgattctt
atgcatgatggatatttacatgaaaaacaggtttttcttgcacataatggagctgctttt
catatggaggaagttgctgacaaattcttctctcgtaagcttgtgattaatgtatgtgat
atgtatcaccgtttacaaaaattgaaactgagtaaagaagaaaacgctctcctaatcgct
atatctctggtatttactgatcgatgtagtctagaaaaccccagtcttgttgaacagata
caattttcgctgacacagcttcttcaaaaacaacttcaaagaacttgccctagttcggct
ttaagaagatttaccaagataattgattgtctgacaattatgcgagagagttccgaactg
tatctgaaagaatacagcgaactgtgccaggatgaaatggttattgaagaagtgccaatt
atgacggaactcttattcgaagactag
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