Ruditapes philippinarum (Manila clam): 132747548
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Entry
132747548 CDS
T09557
Name
(RefSeq) cytoplasmic FMR1-interacting protein-like isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132747548
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132747548
Factors involved in mRNA localization
Other mRNA localization factors
132747548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
BP28CT
Motif
Other DBs
NCBI-GeneID:
132747548
NCBI-ProteinID:
XP_060592937
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MASGEKITLTDALQNVDVLDELPLPDQQPCIEALSLSIHYQTNFDTNFEDRAAYVTGVAR
YIEEATVHADLNKLLEEGQEYAVMMYTWRCCSRALPQVKSNEQENRVEIYHKIVEVLDPG
VSKLRNFMYFQIRAIERFCGEVKRLCHKEKKNDFVSEAYLVTLGKFINMFAELDELKNMK
SSVKNDYSAYRRAAQFLKVMADPATLEESQNLSMFLATQNKIRDTLKNTLQTIQGYEDLF
ADIISICVHMYENKMYLEPNEKYMLVKVMAFGLFMMDNADNSIYKMDQKKKLSLSKIDKI
LKQLEIVPLYGDMQVAPFQYIKNSTNFDPSKWPNCESGHVSPQSNILANLEPIREDHMSY
ISQLSRHSNEAITTTRESPRTDAENKDLYELALRGLQLLSAWTQQVMELYSWKLLNPTDP
HQNKNCPVESEEYERSTRYNYSSEEKFALIEVIAMIKGLQLLMLRMESVFMDAIRRHIYA
ELQDFVQLVLRDPVRKAIKKKNDVIKVIVMSVRNTCVDWLRGVEPHEDPAMKGKKDPDEG
FFIKVPRRNVGPSTTQLYMVRTMLESLIAEKNTGGKKTLRKDIDYQHFLAIDNFHKNSFF
WSYVLNFNESLHNSCNLSQLWYREFFLEMTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYILYPLDLYNDSAHNALILFHQQFLYDEIEAEVNLCFDQFVYKLSDQIFAHYKHLAASM
MLDKRFRAECANAGITISYPVANRYETLLKQRHVQLLGRSIDLNRLIGQRINAALQKSLE
VAISRFEGGDITGIMELEGLIDCNKLTHKLLKKFLTLNKFDAMLREANHNVSAPYGRTTL
HVFWELNYDFLPNFCYNAATNRFVKTKLVLSEPSARDKPPNPSHPYIWGTKSLTTSFSAI
YSQYAGFVGPPHFRVICRLLGYQGIAVVVEELLKIVSDQLKGPLMKYTKTLMTIMPQNCR
LLRYDYGSPGVMGYYQAQLSELIQYPDMRTEVFQIFREVGNAILFCLLIEQALTQEEVCD
LKHAAPFQNIIPKPFIPVKEGESRKEKEQELKAMMKRLEAKYQALQVVPVIGKFGNQKQS
DIAQEGDLLTRERLCCGLSMFEIILKRIQSFLDDPVWHGPAPANGVMNVDECTEFHRLWS
AIQFVFCVPVGEHEYTVEELFGEGLNWAGCAIIVLLGQQRRFEALDFCYHVLKVNRVDMK
DENVKGIQLKKMVDRIRKFQILNNQVFAVLNKYLRSEDRDGLPVEHVRCFQPPIHHSLAT
TI
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggtgagaagataacgcttactgatgcattgcagaatgttgatgttctggat
gagttacctctccctgatcaacaaccatgtatcgaagctttatcactttctatacactac
cagaccaactttgacacaaattttgaagacagagcagcctatgttactggtgttgccaga
tacattgaggaggccacagtccatgctgatcttaataagttgttggaagaaggacaagaa
tatgctgttatgatgtatacatggagatgctgctccagggccttacctcaggtaaagagc
aatgagcaagagaatagagtagagatatatcacaagatagtcgaggtactggatcctggc
gtatctaaactcaggaactttatgtacttccagataagagcaattgaacgtttttgtggc
gaggtaaaaagattatgtcacaaggagaagaaaaacgactttgtatctgaggcttacctc
gtcacgcttggcaaattcatcaacatgtttgccgaacttgatgaactgaaaaatatgaaa
tctagtgtgaagaacgattattcagcttatagaagagctgcacagtttttgaaggtaatg
gccgaccctgccactttagaggaatcacagaacctttcaatgttccttgccactcaaaac
aagatacgagacacattaaagaataccctgcagactatacagggatatgaggacttattt
gctgacatcatcagtatatgtgtacacatgtatgaaaataaaatgtacctggaaccaaat
gaaaaatacatgttagttaaggtgatggcatttggtttatttatgatggacaatgctgac
aacagtatttataagatggaccagaaaaagaaactcagcctctctaagatagacaaaatt
ctcaagcaattagaaattgttcccctttatggagatatgcaagttgcacccttccagtac
atcaaaaacagtacaaactttgatccgtcaaagtggccaaactgtgagtcaggtcatgtg
agcccacagtctaacatcctagctaaccttgaaccaatcagagaagatcatatgtcatat
attagtcaactctcaagacatagtaacgaggcaataacaacaacaagagagagtccaaga
acagatgcagaaaataaagatctgtatgaacttgctctccggggtttacaactgctttct
gcatggactcaacaagtcatggaactgtattcctggaagttgttgaatcctacagatccg
catcagaacaagaattgtcctgtagagtcagaggagtatgaaaggtcaacacgttataac
tacagcagtgaggagaagtttgctctaatagaggtgatagcaatgataaaagggttacag
ttgcttatgttacgtatggagtcagtgttcatggacgctatacggcgccatatttatgca
gagctacaggactttgtacagcttgttctcagagatccagtcaggaaggcaataaagaag
aagaatgatgtcattaaagtaattgtgatgtctgtacgtaacacatgtgtagattggctg
agaggagttgaacctcatgaagaccctgctatgaagggaaagaaagacccggatgaaggg
ttctttattaaagttccaagacgcaatgtagggccatcaactacccagttgtacatggta
cgcaccatgttagaatctctcattgctgagaaaaatacaggaggaaagaaaactttgaga
aaggacattgactaccaacattttctcgccattgataatttccacaaaaattcctttttt
tggtcctatgttctgaactttaatgaatctctacacaacagttgtaacttgtcacaactc
tggtaccgggaattcttccttgagatgaccatgggacgtagaatacagttcccaatagaa
atgtctatgccgtggatactgactgaccacatcctagaaaccaaagaaccatctatgatg
gaatacatcttgtacccattagatctgtacaatgacagtgcccataatgcactcatactg
ttccatcaacaatttctctatgatgaaattgaagctgaggtaaatctgtgctttgaccag
tttgtgtataaacttagtgaccagatctttgcccactataagcatctggctgcaagtatg
atgttagacaagaggtttcgtgctgaatgtgctaatgctggtataactataagttatcca
gttgctaatcgctatgagactttattaaaacagcgccatgtacaactactgggacgttct
attgatctcaacagactgattggtcagagaattaatgctgcattacaaaagtcactggag
gtggctatttcaagatttgagggtggagatattacaggaattatggaattagaaggtctg
atagattgtaacaagctgacacacaaactgttgaagaagtttctgacattgaacaagttt
gatgctatgttacgtgaggctaatcataatgtgtcagcaccatatggaagaaccacctta
catgtgttctgggaactcaactatgatttcctgccaaacttctgctacaatgctgccact
aataggtttgtaaagacaaagttggtattgagtgaaccaagtgctcgtgataaaccccca
aatccttcccatccttatatctggggaacaaagtcattgaccacctcgttcagcgctatc
tatagccagtatgcaggttttgttgggcctccacatttccgcgtgatctgtcggttgcta
ggataccagggtattgctgtagtcgtggaagaacttctcaagattgtatcagatcagttg
aagggaccattgatgaagtacacaaaaactttgatgacaatcatgccacagaattgtcgt
ctgctgagatatgattatgggtcaccaggtgtaatgggttactaccaggcccagctatct
gagttaatacagtacccagacatgaggacagaggtattccaaatcttccgggaagtaggc
aatgccattttgttttgtctcctcatcgaacaggcattgacacaggaagaagtgtgtgat
ttaaaacatgcagcacctttccaaaacatcatacctaaaccatttatacctgtcaaagag
ggtgagagcagaaaagaaaaagaacaagaattgaaggctatgatgaaaagactggaagct
aaataccaagccttacaagttgtacctgttataggaaagtttggtaatcagaagcaatct
gacatagctcaggaaggtgatctgttgacaagggaaagactttgttgtgggttgtctatg
tttgaaatcatcttgaagcgtattcagtcattcctagatgatccagtctggcatggtccg
gcccctgctaatggtgtaatgaatgtagatgagtgtacggagttccacagactatggagt
gctatacagtttgtgttctgtgtacctgtaggagaacatgagtacactgttgaagagtta
tttggtgagggtttgaactgggctggctgtgctatcattgtgttactaggacaacagaga
aggtttgaggccttggatttctgctaccatgtcctgaaagtaaacagggtggacatgaag
gatgagaatgtgaagggcattcaactgaagaagatggttgacaggataagaaagtttcag
attttgaacaaccaggtatttgctgtactgaacaagtacctgaggtcagaggaccgagat
ggtctacctgtagaacatgtacgctgtttccagcctcccatacatcattcacttgccaca
actatatag
DBGET
integrated database retrieval system
