Ruditapes philippinarum (Manila clam): 132747583
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Entry
132747583 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132747583
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132747583
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132747583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-C3HC4_3
zf-RING_16
zf_RING_Vps8
zf-RING_4
zf-RING_Vps41
PHD_NSD
DUF1272
CLIP1
HAUS1
FANCL_C
LEKR1
U-box_ZFPL1
Prok-RING_4
zf-RING-like
FAR1_N
RINGv
Prok-RING_1
PHD
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
132747583
NCBI-ProteinID:
XP_060592986
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MRAQCIICQELFENDDQVISAISCGHTFHNHCLNQWLENGRTCPSCRVQVDKRKIIERLY
FDAPEDNDGVVDDGKLQNEIDRLKLEVRKRDKEKNDIVKEKGKQDDRIEELQKARDRMSK
LLKEEQTKVSAHLKTLKYYESQQKSLDLERQEYRKIKQKLVTLQSLEVLLNGAESDAADI
ISSAGEGGSAVQHLSRQVAFMKREYEKLKLEKRQMKEHYEKIQQTDMSKNKKINDLTKQC
AIFQEQLERSEGDLKLSEKEVEMLKNKNRKLRDRLKSAISPSSNPGSSSFTNLLDESMKL
QAFSASTPKLEHPEGSQNIDLDLTPDLFTSPVQNTQAEHSEKPSSSCDTALSERSFGKSQ
KRSRDSEDTENQEQTKYLKITSAAEKNAQKLKRIKSESAIKGSNSITTLASMNIFKKREL
GERSNNQRSIIQKGFDGLGGHTTHINPIGNPFKKPTVKKSSSQSKLSKFSKTPSLPKLDN
FVIIDD
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcacaatgtatcatttgtcaggaactgtttgagaatgatgatcaggtgatatcg
gcaattagttgtggtcatacatttcataatcattgtttgaaccagtggttagagaatggt
aggacgtgccctagctgtcgtgtacaggttgataagagaaagatcatcgaaagattatat
tttgatgcacctgaagataatgacggtgttgtagatgatggaaaactgcaaaatgagata
gacagacttaaattagaggttagaaaacgagacaaagaaaaaaatgatatagtgaaggaa
aaggggaaacaagatgataggattgaggagctacagaaagccagagatagaatgtctaaa
ctgcttaaagaggaacagactaaagtcagtgctcatctgaagacgttgaagtattatgag
agccaacagaaatcattggatctggaacgacaggagtaccgtaaaatcaaacagaaatta
gtgacactacagagccttgaagtcctgcttaatggtgccgaatctgacgcagctgatatc
atttccagtgccggggaaggtgggagtgccgtccaacatttgtcaaggcaagtggcattt
atgaagcgtgaatatgagaaactaaaattagaaaaacgtcaaatgaaggaacattacgag
aaaattcaacagacagatatgtcgaaaaataagaaaattaatgatctaactaaacaatgt
gcaatatttcaggagcagttggaacgctcagaaggtgatcttaaactctccgaaaaagag
gttgaaatgttaaaaaacaaaaacaggaagttacgagatagacttaaatcagcaataagt
cctagttctaatccagggagttcaagttttacaaatttattggacgagagtatgaaactg
caggcattttctgcatcgacaccaaaattagaacacccggagggtagccagaatattgac
ttggacttgacaccagacttgttcacatcacctgttcaaaatacacaagctgagcattcc
gagaagcccagttcttcctgtgatactgctttatctgaaaggtcatttggaaaatcccag
aaaagatcgcgtgatagcgaagacacagaaaaccaggaacaaacaaaatacctcaaaata
acgtctgcagcggagaaaaatgctcaaaagttgaaacgtatcaaaagtgaaagtgctatc
aaaggttctaattctataacaacattagcttccatgaatatatttaagaaacgtgaactt
ggggagcgcagtaacaatcaacgtagcattatacagaagggttttgacggccttgggggt
catactacgcatataaaccctattggaaacccttttaaaaagccgacggtcaagaaaagc
tctagtcaaagtaaactgtccaagttcagtaaaacaccatcgttaccaaaacttgataac
tttgtgattattgatgattag
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