Ruditapes philippinarum (Manila clam): 132747772
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Entry
132747772 CDS
T09557
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132747772
Membrane trafficking [BR:
rphi04131
]
Protein recycling
Others
EARP complex
132747772
Endosome - Golgi transport
Tethering complex
GARP complex
132747772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec5
VPS51_Exo84_N
Dor1
Vps54_N
EXOC6_Sec15_N
Vps53_N
COG2_N
IFT57
COG5_N
YxiJ
Occludin_ELL
COG4_N
Sec8_N
DUF3135
KfrA_N
AHSP
Motif
Other DBs
NCBI-GeneID:
132747772
NCBI-ProteinID:
XP_060593250
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MADSAEKNDTDEAERRKRHGMLKMYYGLDEDKAGGASLDPCDIDGAHFKPDMFLGKLIRE
KSLTELMDKESEMLKQIRSLDSDMQTLVYENYNKFISATDTIRKMKNDFRKMEDEMDHLA
TNMSRITEFSGNISHTLQDRRQHITKLSGVHSLLKKLQFLFELPARLKKCIEMKAYSQAV
RYYTKAQRVLHQYQHMPSFQGINSDCSQIIKELRGHLKQQFRDKESTPKQLAECVDLLLQ
LDEPAEQLCEEFLAHARRKLDSDLEELQFQISLQKGEGAQKEAERASQTYLDNSMDVLAF
VDCGCNGFLSNMCLVIASYNDMFLNRQQDSEELDAIASKKLVTFVHTLMEVYFNCVQERV
QLEKETGDNTILVRALDRFHRRLQAMNKLLPDTDFSRAGTNIVSTAARDRVSHYLESLKQ
HFTDCMTDIRQNLASPRVASKQEQGANLTELLSNIQITTLEQVKSVLVNLQVFTAPDITF
AMKPYFRGPFCTQGVREGLVVAYIQHITKVCQDFCEGTGSAPPALLLILSRLCSDFESST
ISYLITLTEEQFDMDHKLEVTSVSSLCADIKQTAQNLLNHYVKVQGLAISQMLRKSVETR
DWLNTIEPRNVRAVMKRVVEDITSIDSQVGQLYEEGVRKERSSDSSRRAHSYSYAASQQK
RGQWNYTPSIDNSLMSNIQKLFSEKIEIFSAVEFSKVSVLTGIIKISLKTFMECVRLRIF
GRYGLQQIQVDTYYLQLYLWRFVSDENLVQVLLDEIVCSTVHRCLDPVMMEPSVIELICE
RG
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagtgcagaaaaaaatgacactgatgaggcggagaggagaaagcggcatgga
atgttaaagatgtattatggcctggacgaggataaagcgggtggggcatcccttgatcca
tgtgatattgatggtgctcatttcaaacctgacatgttcctgggcaaactcatacgagaa
aagtccttaacagagctgatggacaaagagtcagaaatgctgaagcagattcggtctcta
gatagtgatatgcagacactggtgtatgaaaattataacaagtttatcagtgcaacagat
acaatcaggaaaatgaagaatgattttcgtaagatggaggacgaaatggatcatcttgct
accaatatgtcacgcatcaccgaatttagcggtaatatttctcatactttacaagaccgc
agacagcatataacaaaattatcaggagtgcattcattattaaagaagctacagtttctg
tttgagctaccggcacgtctcaagaaatgtattgaaatgaaggcatacagtcaagctgtc
aggtactacacaaaggctcagagagtgttacatcagtaccaacatatgccaagttttcaa
ggtattaactctgattgtagtcagattatcaaagaattaagaggccacctgaaacaacag
ttcagagataaagagtccacaccaaaacaactagccgagtgtgtagatctcttgttacag
ctagatgagccagcggaacaattatgtgaggaatttctggcacatgcaagaagaaaattg
gacagtgatctggaggaactccagtttcagatcagtctacagaaaggggagggagctcag
aaggaggctgagagagcttcacaaacatatctagataattctatggatgttctggcgttt
gttgactgtggctgtaatggtttccttagcaacatgtgcctagtgatagcttcttataat
gatatgtttttaaacagacaacaagatagtgaagagcttgatgccatagcatcaaaaaag
cttgtaacatttgtacatacactgatggaggtctactttaattgtgtacaagagagagtc
cagttagagaaagaaactggagataatacaattcttgtaagagctcttgatagattccac
agacgcttgcaggccatgaataagcttctacctgacacagacttttcaagggctggaaca
aatattgtatctacagctgctagagatagagtatcacactacctggagtctcttaaacaa
cattttacagattgtatgacagatatacgtcagaatctggcaagtccacgtgtagccagt
aaacaagaacagggggccaatcttacagaactgttgagtaatattcagattaccacctta
gagcaagttaaatctgttctggtaaaccttcaggtatttacagctccagatattacattt
gctatgaagccatattttagaggaccattttgtacccagggtgtaagggaaggtctggtt
gtagcatatatccagcacattaccaaggtgtgccaggatttctgtgagggtacaggttcg
gcacctcctgctttactgcttatcttgtcacggttgtgctcggactttgagagttctaca
atatcatacctgataacattgacagaggagcagtttgacatggatcataagttagaagtt
acatcagtctcttcattgtgtgcagacattaaacagactgcccagaatcttcttaaccat
tatgtcaaagttcaaggtctagctatatcacagatgttacgtaagagtgtggagacacga
gactggttaaataccatagaaccacgtaatgtacgagctgtcatgaaacgagtggtagaa
gacatcacatcaatagattcacaggtaggacaactatatgaggaaggtgtaaggaaggag
agaagtagtgactctagtcgtagagcacatagttatagttatgctgcctcacaacaaaaa
cgtggacagtggaactatacacctagcatagacaacagtctgatgagcaatatacagaaa
ctgttttctgagaaaattgagatatttagtgctgtagaattctccaaggtctctgtactt
actggcatcattaaaatcagcttgaagacatttatggagtgtgtaagattgaggatattt
ggtcgctatgggttacagcagatacaagttgatacctactatctacaattatatctatgg
agatttgtctcagatgaaaatttagttcaagttttattagatgagatagtatgtagtaca
gtacacagatgtttagatccagtgatgatggaacctagtgtgattgagctgatatgtgag
agaggatga
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integrated database retrieval system
