Ruditapes philippinarum (Manila clam): 132748650
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Entry
132748650 CDS
T09557
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-3-like
KO
K04814
nicotinic acetylcholine receptor beta-3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132748650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132748650
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132748650
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CENP-B_dimeris
DUF3246
Motif
Other DBs
NCBI-GeneID:
132748650
NCBI-ProteinID:
XP_060594241
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MQENCAFSAGIDGDDDDSDDNDNDSSVNVPTYSEACDYVNKLKTFAVSLGNQTLVDNIVK
FDDELCNEILNKPKQTQITDFFEKRTVLSQMRERKSQKPVPTINILFRHPSKYLVYFSHF
NLDSDLNLKAGEFILASTLETSLGQTYTEMDSLLGHLFNETRYNKDLRPLENQSHVIQVN
FTQYVKSIENLDISSGELLITGYFEIKWTDEMLTWDPALFGGREKIQLPKDKYWKPEISL
TDGPANEDTSIYGSGFYPAWATYQGIVMVIAAGSYKTKCIVDTTFYPYDMHSCYFQFIVS
NHDSTELMISSPSPDIHFRDFKENGEWEVISTDTNVMLVKEKNIDSVAIPMYQSSFLLKR
RSKFEMINSLTPIMFMLFLNIATCFVRPESGERTTFAITLYLALVFAATSLTETIPRNSL
KMPMISYQLLSVNIINTVGVLWSIFIVNCASKSVAHRYVPNFLLRMITKRRQKSKNNSKM
VPVKNCKMVSVDSVVSILPVEGTDISDGQKEEVCNEPQSAEITGHEVAEVLDTIYFWMII
ICITLANVIYSAFVYKSWFS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaattgtgctttctctgccggcattgatggtgatgatgatgacagtgatgac
aatgataatgattcatcagtaaatgtaccgacttactctgaggcttgtgactatgttaat
aaacttaaaacctttgcggtcagtttaggaaatcagacactggttgataacattgtcaaa
tttgatgatgagctgtgcaacgagatcttgaacaaaccgaaacaaacacagattactgat
ttctttgaaaagagaacagttttaagtcaaatgagggagagaaagtcacaaaaaccagtc
ccaaccataaatatactattccgacatccaagtaaatatctggtatacttttcacatttt
aatcttgattctgaccttaaccttaaagctggagaatttattcttgcatcaactcttgag
acatcgcttggacaaacatacactgaaatggactctttgctaggacatcttttcaatgag
acaagatataacaaagatcttagacctttagaaaaccaaagtcacgtaattcaggtaaac
tttacacagtatgtaaaaagcatcgagaatctagacatctcgtcaggagagcttcttata
actggatacttcgaaataaaatggactgatgaaatgttgacttgggaccctgctcttttt
ggaggtagagaaaaaatacagttgcccaaagataagtattggaaaccagagatttcctta
acagacggaccggcaaatgaggacacttcaatttatgggagcggcttctatcccgcgtgg
gccacttaccaagggatagtaatggtcattgctgcaggcagttacaagacgaaatgtatt
gttgacacaacattttatccttatgatatgcactcgtgttatttccagttcatcgtgtct
aatcatgactctacagaacttatgatatcttctccttcacccgatattcattttagagat
ttcaaagaaaatggtgaatgggaagttataagtacagatacaaatgtaatgctggtaaaa
gagaaaaacatagacagtgttgctataccaatgtatcagtcatcgtttttgttaaaaaga
aggtccaaatttgaaatgataaattcacttacaccgatcatgtttatgttatttctgaat
attgcaacttgctttgttcgccctgaatccggtgaaaggacaacgtttgcaataacgcta
tatttagcattagtttttgcagcaacatcattaacagagacaatacctagaaattcatta
aaaatgccgatgatttcgtatcaactgctttcggttaatatcatcaacacggttggcgtt
ttatggagcatatttattgttaattgtgcaagtaaatctgtggctcatagatatgtgcca
aactttcttctgaggatgattacaaaaaggagacagaaaagcaaaaacaatagtaaaatg
gttcctgtgaaaaattgtaaaatggtttctgtagattcagttgtatcgatattgcctgtt
gagggtacggatattagtgatggtcaaaaggaagaagtatgtaatgaaccacaatctgct
gaaataactggacacgaggtggcggaagttctcgatacaatttatttctggatgatcatt
atttgtattactttagcaaatgtcatttacagcgcatttgtgtacaaaagttggttcagt
tag
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