KEGG   Ruditapes philippinarum (Manila clam): 132748735
Entry
132748735         CDS       T09557                                 
Name
(RefSeq) ribosome biogenesis protein bop1-B-like
  KO
K14824  ribosome biogenesis protein ERB1
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rphi03009]
    132748735
Ribosome biogenesis [BR:rphi03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    132748735
SSDB
Motif
Pfam: BOP1NT WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_SCAP MIOS_WD40 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_HPS5 DUF7099 Pentapeptide Beta-prop_IP5PC_F Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 132748735
NCBI-ProteinID: XP_060594341
LinkDB
Position
Unknown
AA seq 797 aa
MSLKRKSNTETFSQLTVDNGTDLFVDEPADDSESDLDNDDTTDSSDSDSSVYSGLGEDEE
DSSDSDEEIDEGSDLEGSNLESSDLEGSDLENESDEEGRKTGKEKTHKDLSNDLVNKKNN
TKTKNKSQKLQKPVKETKIEVDQEIKVKDKEEEDNVKETDEYKEDSSDEEDIRNTVGNIP
MEWYKNYKHIGYDVEGRKLVKPQQGDQLDEFLDKADDPNYWRTVHNKLTGQKIVLSKEDI
QLIQNIQKKQHPTESTDEQYQAWVDWFSSEVMIHPLSNQPEHKRSFIPSKWERLKVGQMV
HALKMGWMKPSKTDEEKDKEEEEEDEPNFYMIWKDEDETEISKRYRQHIPAPKLSLPGHA
ESYNPPPEYIFTKEEAEKWKEQEPEERRINFMPKKFSSLRSVPSYRRFINERFERCLDLY
LCPRQRKVRMNVDPEDLIPKLPKPKDLQPFPTTQSIIYKGHTGLVRSISVDPSGQWLVSG
SDDGTIKIWEVASGRCMKTLHVEGRISSLTWNPNPAVCLVACAIDKTVMIFNPGMGDKLQ
LSNTDNMLNSYIKQEETQDSRVPVSWSVYEGKEYDDGYRLKLPHGFEVSQVTWHGKGDYF
ATVMPNGQSKSVLIHQLSRRRSQNPFSKSKGIVQCVRFHPVRPFLFVATQRYIRVYNLLK
QEMSKKLVTNCKWVSSMAVHPEGDNVIIGGYDSRMSWFDLDLSTKPYQTLKHHKKAIRQV
CYHKRYPLFASASDDCSVIVCHGMVYNDLLQNPLIVPVKVLRGHTSEKDVGILDCVFHPL
QPWIFSAGADATIRLYT
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgtcattaaaacggaaatcaaacactgagactttcagtcaacttacagttgataacggg
actgatttgtttgtggatgaacctgcagatgatagtgagtctgatctagacaatgatgac
acaacagactccagtgattcagactctagcgtgtactctggtctcggagaggacgaagaa
gattcttctgattcagatgaagaaatagatgaaggcagtgaccttgaaggcagcaacctt
gaaagcagtgaccttgaaggcagtgaccttgaaaatgaatctgatgaagaaggtagaaag
acaggcaaagaaaaaacacataaagatttatctaatgacttagtgaataagaaaaataac
acaaagacaaaaaacaaatcacagaaattgcaaaagcctgtaaaagagacgaaaattgag
gttgatcaagaaataaaggtgaaagataaagaagaggaagacaatgttaaagaaactgat
gaatataaagaagattcatcagatgaagaggatatacgtaacactgtgggtaatatacca
atggaatggtacaagaattataagcatattggctatgacgtagaaggtcgtaaacttgtg
aagccgcagcagggtgaccagctggacgagttcctcgacaaagcagatgaccccaattac
tggcgtactgtacataacaagttaactggacagaaaatagtgctgagtaaggaggatata
cagttgatacagaacatacagaagaaacaacatccaacagaatctacagatgaacaatat
caggcctgggttgactggttttctagcgaagtgatgattcatccattgtctaaccagcca
gaacataagaggagttttataccttcaaaatgggagagattgaaagtaggtcagatggtt
catgcattaaagatgggttggatgaaaccatcaaagacggacgaggagaaagacaaggag
gaagaagaagaagatgaacccaacttttatatgatctggaaagatgaagatgagacagaa
ataagtaagaggtacaggcagcatataccagcaccgaaactctcgctgcctggtcatgct
gagagttataatcctccgccagagtatatatttacaaaggaagaggcagagaagtggaaa
gaacaagagcctgaagagaggcgtattaattttatgcctaagaagttttcttctttacga
agtgtcccatcttatagaagattcatcaatgagaggtttgaaagatgccttgatttgtac
ctgtgccccagacaaaggaaagtacgaatgaatgttgatccagaggatctgataccaaaa
ttgcccaaaccaaaagaccttcagccgttcccaactacacagtccattatttacaaaggt
catactggtctggtacggagtatatctgtggaccctagtggtcagtggttggtatcaggc
tctgatgatggtactatcaagatttgggaggtagcgtcaggtagatgtatgaaaacgtta
catgttgaaggcaggatatcatcactcacatggaaccctaatccagctgtttgtcttgtt
gcttgtgcaatagataaaactgtgatgatattcaatcctggaatgggagacaagttacaa
ctaagcaatacagataacatgttgaactcttatataaaacaagaggagacacaggattct
agggtacctgttagctggagtgtttatgaaggaaaggaatatgatgatgggtatagacta
aaacttccacatggttttgaagtgtcacaggtgacctggcatggaaagggagattacttc
gctacagtgatgcctaatggacagtcgaagtccgtgttgatacatcagttgtcacgtcga
cgctcacagaatccattctcaaagtctaaaggcatagtacagtgtgttagatttcaccca
gtcagaccatttctctttgttgctacacaaagatatattcgtgtatataacttattaaaa
caagagatgagtaagaaacttgtgacaaattgtaaatgggtctccagcatggcggtgcat
ccagaaggagacaatgtgattataggtggttacgacagccggatgagttggtttgacctt
gacctctcaacaaaaccttatcaaactctcaaacatcacaagaaagctataagacaagtt
tgttatcataaaagatatccgttgtttgcctcggcaagtgatgattgctcggttattgtc
tgtcatggaatggtttacaatgacttactgcagaatcctctcatagtaccagttaaagta
ttgagaggtcacacgtcggagaaagatgtgggaatattagactgcgtgttccatccttta
caaccctggatcttctccgcaggggccgatgccactatacgattatatacttga

DBGET integrated database retrieval system