KEGG   Ruditapes philippinarum (Manila clam): 132748760
Entry
132748760         CDS       T09557                                 
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    132748760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rphi03000]
    132748760
   03021 Transcription machinery [BR:rphi03021]
    132748760
Transcription factors [BR:rphi03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    132748760
Transcription machinery [BR:rphi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     132748760
  RNA polymerase III system
    TFIIIB
     132748760
  RNA polymerase I system
    SL1/TIF-1B
     132748760
SSDB
Motif
Pfam: TBP DUF3874
Other DBs
NCBI-GeneID: 132748760
NCBI-ProteinID: XP_060594380
LinkDB
Position
Unknown
AA seq 265 aa
MADGQVIAGGVSQLPGTNGGVIAPEGYDPNPQPEEEDVPMLDININNVVCSFNTKCHLNL
KRIAMEGTNVEYHRQHGMLNMRLRNPYTTASVWSSGKITCTGALSEEFSKIAARKFARKI
QKMGYKVKFTNFRIVNVLGTCSLPFALDITKFSMEHKEASYEPELHPGVTYRIKSPKATL
KIFSTGSITVTAPRVANVQSAIEYIYPLVADFNAGPRSVKTSSSVNNVMNKRLQAERKVV
DDESDFDGSSMEDSDGDFDSDVSHD
NT seq 798 nt   +upstreamnt  +downstreamnt
atggcggacggtcaagtcatagctggtggagtaagccagcttcctggtacaaatggtgga
gttattgcccctgaaggttatgatcctaaccctcaaccagaggaagaggacgttccaatg
ttagatattaatataaacaatgttgtatgcagctttaataccaagtgtcatctgaatttg
aaaagaattgccatggagggtacaaatgtagaatatcacagacaacatgggatgttaaat
atgagattaagaaatccttacactacagccagtgtgtggtcttctggtaagatcacatgc
acaggggccctgagtgaagagttttccaaaatagctgcaaggaagtttgcaagaaaaata
cagaaaatgggatataaagtaaagttcaccaatttccgtatagtgaacgtccttggaaca
tgttcactgccatttgcccttgatattactaaattttccatggaacacaaggaagccagt
tatgaacctgagctgcatccaggtgttacttacagaataaaaagtcccaaggctacactg
aaaatattctccaccggcagtataactgtcacagccccacgggtagcaaatgtacagtca
gcaatagaatatatatatccattagtggcagactttaatgctggacctagatctgtaaaa
acttcttctagtgtgaacaatgtgatgaacaaaagactacaggctgagcgcaaagtcgtc
gatgatgaatcggattttgacggaagtagtatggaagacagtgacggagattttgacagt
gatgttagtcatgattaa

DBGET integrated database retrieval system