Ruditapes philippinarum (Manila clam): 132749166
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Entry
132749166 CDS
T09557
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like isoform X1
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132749166
Ion channels [BR:
rphi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
132749166
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans_N
Ion_trans
cNMP_binding
Osw5
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
132749166
NCBI-ProteinID:
XP_060594849
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MHVKDTIRFPVLSLEKLCSVLWAINGLLLLAEGILYLEVRPRVTMSLEAGSPTEPYREDA
KSDMDTRNGDKDKLLPVTSKEEDVAADSDETVRDVHVSESTTGSSPQHSSPKLSTPPHRR
AASLCPSIQRSDSVKFNKKPANGNAIRSINMDNTQRTPRASKRVPSLKLKRMGAQSRNLN
TPNTQDKIDSAMPCLPQCARENPSITITIDSDDDSIYSDYISPEINYKPEMKVQFIGDET
SLYGTPKEELLPNSTNSVNMEKPSPTSFLREQIYAFFQPSDNKLAMKLFGNKNALLKEKM
RHKRQGNWVIHPCSNFRFYWDLFMLVLLIANLIILPVAISFFNDDLSTQWIVFNCISDTV
FFFDILINFRTGIILNDFADEIILDPKLIAKHYFKSWFFLDLISSIPMDYIFLMWDSEAN
FSQLFHAGKQDELDASPYWQGRALRMLRLAKLLSLLRLLRLSRLVRYVQQWEEVSMLRGT
MNMFPALRRSKFSQFLAVAGKFMRIFNLICLMFLLGHWNGCLQFLVPTLQDFPKDCWVSI
EELQDAHWAHQYTWSLFKALSHMLCIGYGRFPPQNMTDTWLTILSMLSGATCYALFLGHT
TTIIQSFDTSRRLYNEKFKQVEEYMIYRKLPRSLRQKVAEYYEHRYQGKMFDEERILGEL
NECLRQDVINHNCRSLVASVPFFTNADPQFVSEVVSKLQFEVFQAGDYIIREGTMGSKMY
FIQEGIVDVITTEGEVATSLSDGSYFGEICLLTNAKRVASVRAETYVNLYSLSVEHFKDV
LDRYPVMRRTMESVAAERLTKIGKNPSIVSSRADLDEDQRLLNEIVLESTPVVTSASEDE
DKDSDDSSGSSKSNKNKKKFKLDFSAKLHRITEERKSRSRENLKDVHVDSRFRNILRKAP
SGPNLFGLLAPPVFSERKRSGSVGANLGMIMESFTEDSSHKKRDDSSIGNKFFKVFEKEG
KKRKSDSRTSVCDESPTSEGLHMQFLTVPHDKTPSKSKEHPSSPKCDTKKEQMPHKSVIK
TDSGPSSKSDRPMQVNFTLSTTEDELTPLTTSDQSESNTTKKKKIRHVDFEEAKLIPFNN
GKSSSDEEVKKCESPL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcaaagacacgatacgatttccagtactgtctttagaaaaactatgctccgtt
ttgtgggcaataaacgggctactcttattagctgaaggaatattatatttggaagttcgg
ccgagagtaacaatgtctctcgaagcggggtcacccactgaaccttaccgtgaagacgct
aaatcagacatggatacaaggaacggagacaaagataaattactgcctgttacctcgaag
gaggaggacgtagctgcagacagcgacgaaaccgtgcgggatgttcatgtgtcggaatct
accaccggaagttcccctcaacactcgtcaccgaagctgtccacacctccacacaggagg
gctgcgtcactatgtccaagcatacagagatctgattcagttaagtttaataagaaaccg
gccaatggaaacgctataagatcgatcaatatggataatactcaaagaactccgcgagct
tctaaacgcgttccgagtttaaaacttaaacgaatgggcgcgcagtcacggaatttaaac
actccaaatacacaggataaaatagattctgctatgccgtgtttgccgcagtgtgcgcgt
gaaaatccatcgattacgatcactatagattcggacgatgattcaatatacagtgactat
ataagtcctgaaattaactacaagccagaaatgaaggttcaatttatcggagatgagact
agcctttatggcacgccaaaagaggaattattgccgaatagtacaaatagtgttaatatg
gaaaaaccaagtccaactagttttttgagggaacaaatttatgcatttttccaaccttcg
gataataagcttgctatgaaattatttggcaataaaaatgcattgctcaaagaaaagatg
cggcataaacgccaagggaactgggttatccacccttgtagcaatttcaggttttactgg
gacctctttatgttggttttactgatagcaaacctcattatattaccggtagctatctca
ttctttaacgatgatctcagcacacaatggattgtttttaactgcattagtgatacagtc
ttcttctttgatatacttatcaattttagaacaggaattatcttgaatgactttgccgac
gagattattcttgatcctaaacttatcgccaagcattattttaaatcctggtttttcctg
gatctgataagttccataccaatggactatatatttctaatgtgggactcggaggcgaat
tttagccaactcttccacgcaggtaaacaagacgagttggacgcatccccatactggcaa
ggtcgtgccttgcgcatgcttcgtcttgcaaagctgctaagcttattacgtttgttacgg
ctctcccgattggtccgttatgttcaacaatgggaagaggtcagtatgttacgtggaaca
atgaatatgtttccggccttgcgtagaagcaagttcagtcagtttttagcagttgctggt
aagtttatgcggatcttcaaccttatctgtcttatgtttttacttggacactggaacggt
tgtctgcagtttctcgtcccaactctacaagacttccctaaagattgttgggtatcgatt
gaagagctgcaggatgcccactgggctcatcagtacacatggtctctatttaaagccctg
tcacatatgttatgtattggatacggtcgtttcccgccacaaaacatgaccgacacgtgg
ttgaccatactgagcatgctcagtggcgccacttgctatgcattgtttctaggtcacact
acaaccataattcagtcgtttgatacttcaagacgattatataatgagaagtttaaacaa
gttgaagaatatatgatatacagaaaattacctcgttcattgcgacaaaaggtagccgag
tattatgaacacaggtaccaggggaaaatgtttgacgaggagaggattctcggagaactc
aacgaatgtttacgtcaggatgtaataaaccacaactgcagatctctagtcgcttcagtg
ccattttttacaaacgctgaccctcagttcgtatctgaagtggtgagcaaactacagttt
gaagtctttcaagcaggagattatattatcagggagggaacaatgggcagcaaaatgtac
ttcattcaggaaggtattgtcgacgttataacaacagagggggaagtagccacttctctg
tcagacggctcctattttggagaaatatgtcttctaacgaatgcaaaacgggtcgccagt
gttagagcagaaacatatgtaaatttgtactcactatcagtcgagcatttcaaagacgtc
cttgaccgctatccagtaatgagacggacaatggaaagtgttgcagcggaaagacttaca
aagatcggaaagaatccaagtattgtgagtagtcgtgctgatttagatgaagaccagcga
ttgttgaatgaaatagtactggagtcgactccagtcgtaaccagtgctagtgaagacgaa
gacaaagattccgacgatagttccggaagttcgaaaagtaataaaaataagaaaaagttt
aagttagatttcagtgcaaagttgcacagaattacagaagaaaggaaatctaggtctagg
gagaatttgaaggatgttcatgtagatagtaggtttaggaatatccttcggaaagctcct
tcagggccaaatctatttgggctgctagccccacctgtttttagtgaaagaaaacgttct
ggaagtgttggtgcaaacttagggatgattatggagagttttacagaggacagttctcat
aaaaaaagagatgacagtagtataggaaacaaattctttaaagtatttgaaaaagaagga
aagaaacgaaaatccgatagtagaacatctgtctgtgatgaatcaccaacatcggaagga
ttacatatgcaatttttaactgttccccatgataaaactcctagtaaatctaaggagcac
ccaagttctccgaaatgtgatacaaagaaagaacaaatgcctcataaaagtgttattaaa
actgattcaggtccctcgagcaagtcagatagacctatgcaagtaaactttacgctttcc
acaactgaagacgagttaacgcccttgacaacttctgaccaatcagaatcgaatacaact
aagaaaaagaaaatacgacacgtcgattttgaagaggcaaaacttattccatttaacaac
ggcaaaagctcgagtgatgaggaggttaaaaaatgtgaatcaccgttatag
DBGET
integrated database retrieval system
