Ruditapes philippinarum (Manila clam): 132749250
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Entry
132749250 CDS
T09557
Name
(RefSeq) cell division cycle protein 20 homolog
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132749250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132749250
03036 Chromosome and associated proteins [BR:
rphi03036
]
132749250
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
132749250
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
132749250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WDR55
DSE1_N
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_Aladin
CFAP251_N
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_1st
MIOS_WD40
WDR90_beta-prop_4th
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_DCAF4
ASA1
CFAP43_N
Beta-prop_NUP159_NUP214
WDR54
Motif
Other DBs
NCBI-GeneID:
132749250
NCBI-ProteinID:
XP_060594953
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MIRLKKGVKDYLKLLYTNMAERKYTRFHRTAFDRFIPFRPNLDVETSHARLMLRLPDCAE
NELGQFKSPVTKSYARLLSETTHVEDGNVLPICSKPFASPFKKRLTQLFPTRPDEGYSSP
TTDKIRSIPTSPDCIMDMPGLRDDFYTNLLDWSNKNLIAVALFQSAYVWDAESKDCQRIE
IHFPQSYYYISALAWSPRDKALAISDNDGEITICDVEKLQSQRKFVPLRQKCSVGALKWT
NYGIISGNRRGEIRIHDDRCKDSSALKCMDGHHRKDVCGLSVSPGTSYLASGGDDGHVNI
WDLRMMTNCKTIKAHSACVKALSWCPWRQNVIATGGGLNDGNIRLWYAHTGEQLAETATN
LQVCGLLWSEEYNELVSALSSQTPDRNDLVVWNMKKFEFEAVAKLRQHMARPLHIALSPD
ETTIASAGADEALCLWNTFPKRSRRKQWSPWDKSPLNMYNYIR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtttaaaaaaaggtgtgaaagattatttgaaattattatacaccaatatggct
gaacggaagtacacaaggtttcatcggacggcgtttgatagattcatacctttccggccg
aacttggatgttgaaacgtcacacgcgagacttatgctacgtttaccggactgtgcagag
aatgaacttggtcagttcaagagcccagttacaaaatcttacgctcggcttttgtcagaa
acaacgcatgtggaggatggaaatgttttgccaatatgcagtaaaccgtttgcaagtcct
ttcaaaaagcgattgactcaactatttcctacaagaccagatgaagggtacagttctcca
acaactgataaaatccgaagtattccgacatcaccagattgcatcatggacatgccagga
cttagagacgatttttacacaaatttgctagattggagcaataagaatttaattgctgtt
gcactgttccagtcggcatatgtatgggacgccgagtccaaagactgtcagagaattgaa
atacattttccacaatcatattactatatatcggcactggcttggagtccaagagacaaa
gcattggccatatctgataacgacggcgagattacgatttgtgatgtcgaaaagttacaa
tctcagagaaaatttgttccacttagacaaaaatgttcagttggagcactcaagtggaca
aactacggaattataagcggaaaccggagaggtgagatacggattcatgatgacagatgt
aaagatagttcagcgttaaaatgcatggatggacatcaccggaaagacgtctgcggatta
tcagtctcacctggcacgtcatatttggcaagtggaggggatgacggccatgtcaacatt
tgggatctacgaatgatgacaaactgtaaaactatcaaggcccattctgcatgtgttaag
gcactgtcttggtgtccatggagacaaaatgtcatagcaacaggtggtggattaaatgat
ggtaacatacggctatggtacgcacatacgggagaacagctggcagaaaccgccactaat
ttacaggtttgtggtttgttgtggtcagaagaatacaatgaactggtgtcggcccttagc
tctcaaactcccgacagaaacgacctggttgtctggaacatgaagaagttcgagtttgaa
gctgtggctaaactccgtcaacatatggcacgcccgttacatatagcacttagcccggat
gaaactaccatagcttcggcgggcgctgacgaggcattgtgtttgtggaatacatttcca
aagcggtcaagacgtaagcaatggtcaccttgggataaatccccactgaacatgtataat
tatataagataa
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